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scnpilot_p_inoc_scaffold_11529_4

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(3562..3894)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbC n=1 Tax=Hoeflea sp. 108 RepID=UPI0003815591 similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 110.0
  • Bit_score: 199
  • Evalue 2.10e-48
Conjugal transfer protein TrbC {ECO:0000313|EMBL:KEZ17842.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 110.0
  • Bit_score: 200
  • Evalue 1.70e-48
trbC; conjugal transfer protein TrbC similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 110.0
  • Bit_score: 189
  • Evalue 4.60e-46

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Taxonomy

Sphingobium yanoikuyae → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGATCAAACACGCTTTGCGTATCCGCCGGCACATCGCCTCAGCGGTGTGCATGATTTTTCTTTCGCTCGCTTTGGCACCCGCCGCCCACGCTTCGGGCTCGTCCATGCCCTGGGAGGCGCCGCTTCAAAAAATCCTCGAATCGATCGAGGGGCCGGTCGCGAAAATCATCGCCGTTATGATCATTATCATCACTGGTCTGACGCTCGCGTTCGGCGACACGTCGGGCGGCGCCCGCAAGCTGATCCAGATCGTGTTCGGCCTGTCGATCGCGTTCGCGGCGTCGAGCTTCTTCCTGTCGTTCTTCTCGTTTGGCGGCGGGGCGCTCGTTTGA
PROTEIN sequence
Length: 111
MIKHALRIRRHIASAVCMIFLSLALAPAAHASGSSMPWEAPLQKILESIEGPVAKIIAVMIIIITGLTLAFGDTSGGARKLIQIVFGLSIAFAASSFFLSFFSFGGGALV*