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scnpilot_p_inoc_scaffold_10941_4

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 4288..4398

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein HU n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y3L6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 37.0
  • Bit_score: 64
  • Evalue 2.60e-08
DNA-binding protein HU {ECO:0000313|EMBL:AKH41911.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterery similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 37.0
  • Bit_score: 65
  • Evalue 2.20e-08
transcriptional regulator HU subunit alpha similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 36.0
  • Bit_score: 61
  • Evalue 6.30e-08

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Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 111
ATGAACAAGAACGAACTGATCGGCGCTGTTGCCGATGCCAGCGGACTTTCCCGCAGTGACGCAACCAAGGCAGTGGAAGGCGTGTTCGACACGATCACTGCTGCGCTCGCC
PROTEIN sequence
Length: 37
MNKNELIGAVADASGLSRSDATKAVEGVFDTITAALA