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scnpilot_p_inoc_scaffold_12949_6

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(4546..5541)

Top 3 Functional Annotations

Value Algorithm Source
Small conductance mechanosensitive channel MscS n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YM32_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 305.0
  • Bit_score: 419
  • Evalue 2.90e-114
  • rbh
Small conductance mechanosensitive channel MscS {ECO:0000313|EMBL:GAD49502.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobiu similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 305.0
  • Bit_score: 419
  • Evalue 4.10e-114
mechanosensitive ion channel protein similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 329.0
  • Bit_score: 391
  • Evalue 2.40e-106

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGGCCAGCCCGGCCTCCGACGATCCCCTGCGGGGCGCGGAAGGGCTGAAGGACGCAGTCGTCTCCGGCAGCGGAACGCTGGGCGAATATATCGAATGGCTCGACAGCTATGGCGTGCAAGTGGGCACCATGCATTTCTCCGCCTGGAGCGCGCTGGTGGTGGTGGCTGTCATTGCCGGGGTCATCGTCATTTCGCGGCTGGGCGGCAAGCTGGCGCACTGGATGCTGGGCAAGGTCACCGGGCTGGACCTGACGCAGAAGCTGCTGGCCGAAAAGCTGGTTTCCATCACGATCTGGGCGCTGGCGATTCTGGTGGGGATCGACATTCTCGGCATCGATCTCACCGCGCTTACGGTGTTTTCCGGCGCCTTCGGCCTCGCCCTCGGCTTCGGCCTGCAAAAGACCTTCGGCAATCTGCTGGCCGGGATCATCCTGCTGATGGACCGCTCGATCAAACCGGGCGACGTGATCGCGGTGAGCGACCAGTCCGGGCGCGAAAGCTTCGGCCAGATCCGCAAGATCGGCATCCGCGCCATTTCCGTCATCACGCGGGACAAGAAGGAATATCTGATCCCGAACGAGAACCTGATGATCAATCAGGTGGAGAACTGGTCCTATTCCGCGCGGGACGTGCGCGTGAAGGCGCCGCTCAGCGTAGCCTATGCCACCGATCTGGCACTGGCCGAGGAACTGATGCTGCAAGCCGCGCGCGAAACCCCGCGCGTGCTGGAAACGCCCGAGCCCAAGGTGCTGCTGATGGGCTTTGGCGAGAATGGCATCGCCTTTGAAATCCGCTTCTGGATCGTGGACCCGGAAGAGGGAATCAGCAGCGTCCGTTCCGACGTTTATAAACGAGTGTGGCACCTGTTCTGCGAAGCCGGCATCCACATCCCCTTCCCCCAGCGTGAGATCAACATCTCGAATATCGAGCAATTAGAGGATCTTGTGGACGGGTTGAAGGGGCGCAAAAGGGACGAGCGCAAGTCTGCGAGCTAA
PROTEIN sequence
Length: 332
MASPASDDPLRGAEGLKDAVVSGSGTLGEYIEWLDSYGVQVGTMHFSAWSALVVVAVIAGVIVISRLGGKLAHWMLGKVTGLDLTQKLLAEKLVSITIWALAILVGIDILGIDLTALTVFSGAFGLALGFGLQKTFGNLLAGIILLMDRSIKPGDVIAVSDQSGRESFGQIRKIGIRAISVITRDKKEYLIPNENLMINQVENWSYSARDVRVKAPLSVAYATDLALAEELMLQAARETPRVLETPEPKVLLMGFGENGIAFEIRFWIVDPEEGISSVRSDVYKRVWHLFCEAGIHIPFPQREINISNIEQLEDLVDGLKGRKRDERKSAS*