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scnpilot_p_inoc_scaffold_1996_8

Organism: scnpilot_dereplicated_Eukaryote_unknown_16

partial RP 39 / 55 MC: 26 BSCG 17 / 51 MC: 6 ASCG 21 / 38 MC: 8
Location: comp(5690..7654)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RFV1_PHYPA similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 180.0
  • Bit_score: 139
  • Evalue 1.50e-29
snRNA transcription factor {ECO:0000313|EMBL:BAQ95605.1}; TaxID=3218 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariacea similarity UNIPROT
DB: UniProtKB
  • Identity: 37.1
  • Coverage: 197.0
  • Bit_score: 140
  • Evalue 9.40e-30
hypothetical protein; K15210 snRNA-activating protein complex subunit 3 similarity KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 180.0
  • Bit_score: 139
  • Evalue 4.70e-30

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Taxonomy

Physcomitrella patens → Physcomitrella → Funariales → Funariidae → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1965
ATGTCATATATCAAAGCTCATTTCCGATGTATATTCACCATTTTTAATTTGTTTGCGTCTTGTTATAGCGAGGCGCTAACGGTCCTGCAAGCGTCGTCCTCGAGCTCGCGTCCCCGAGACCGCCCCGCCTCTTTAGGCTTCACCCTCTTACCGCAATTCGGCGCCCGTATCCCTTCCGCGGCTGACCTCGACGCCCCACTGGCCGCACTGAAGCACCAACGCAGCGAGGCGCTCAAGAGCAAGCGGTTTGAGGGCGCGCAGAACGCCGTGACTCCGTCGGCGTTGGCGCGGCTGTCATTGGCGGTGGCGGCGCTGCCTGTCGGGAAAGTGCTTACGACTCAGCCCGTTGCGTTCAGCTCGCATCACACCGCTAACAACAACAGTAACAGCAACGCGGCCGTCAGCGCTAACGCCAACACTGGCTCCGATACCAGCACTAATGTCCGTTCTAGCTCTAGCTCTAGTGCTAATGCTAGCTCTAGTGCTAATGCTGGTGCAAGTGCTCACGAGCAACAGCAACAGCAACAGCAGCAACAGCAGCGGGAGCAGCAGGAGACCATTCTCAAAGAGCAGCAACAGCTGGCTTTGGCCGCCGCGGCCGCTGCCCAGACGTGCGTCAGCGCCCCCTTAGCGGCCGACACAGTCATTCTAAGGGCCACGGCCTACTGCCCCAAGTCGCGGGTAAGGGTGCTAGATGTACTCCTGACCGACGATCTTCCCCTCACGGCGCTCCGGGACTGCTTGGACTGCCACTTTGACGACGCAGACGCAGTCAACTGGCAACAACAGCAAATCCATTGCGGTTACAACCCCTACACAAACAACAACAACAGCTCTGCTAACGGGACAGGTGACGGTTTAGTGTGCTTTTTGCCGCGCGCAATGCGTTTTAACGCGCATTTGACTGCTGTCACTCATAGTGTCATTACTGCTGCTCAGAACAACAACAGTGGCAGTGGCGGTAGCGGCGGTAACTCGAGTGTTAATGCTGAGTCAGGCAACGAGGCCGCTGCAGGTGGCGCAAAGCAGAAACAGCAACAGCCGCGTACGAACGATGGCACAGGCCGTTTCACCACGAAGCCGAAACCGAAGCAGCCGTCGAACAAGGGCAAGGGCTCTAAGTCTAAGGGCAGCGCAATGACCGACAACAGCGACGACGACGACGACGACGACGACGACGGCGACGACGAGTTTACTAGCGCCAAGAACGCAAAGGGAAAGAAGGCAAGTGCGAAGTCAAAGACTACAGCAGCCGCTGCTGGTGGTGGTGGTGGTAGTGGTTCTAAGGGCAAGGCCGGCGCTAAGAGCACTGCGAGCACTGCCGATGCCGCGGCTAGCGCGACCGCGAGGCCGTACGCGAGCGTCCCCGCCTCCTTAGTATCGCTCTCCCTCGCCGCGGTGGCTAGCGACCGGGCGCCTCGCCACTTGCTGCCGCACCCCAGCGCGTTTTTCTTCATCGAGAACACGTTTTACGACGACATGCGTTCTCCCAGCGCCTCGCGGCTGTCGGACCCCTACGTGACTTGGGTCGGCGCGAACTCGCGGTACGCGCGACCCGGTTTGGCCCCCTACAAGCAGGCCAACATGGAGCTCACGCCGTTATCGGCGCTGCGGCTGCGGCTGGGCGCGCAGTACCTCTACCAGCACCAAGGGGACTGCCGGCATGTCGTCATCTTCACCGAGATGCGCATGAGGGCTCCCGACGACCTCGACAACCGCGCCGCGTACCCGCTCGTGCTGTTCCGAAAAAAGGCCGCGCTGCTGAAATGCATCATCTGCAGCGTGCACACCGCAGTCGTCGCGACCGTGGGCGACCGGCTGGCTCCGGCGTCGCCAGCGCATTTTTGCGAACAGTGCTACGACGCTCTGCACCGGGACAGGGAGGGGAAACTGCTCTATGGCGACTATCAAGTCTTTCGGTTGTTACCGTTGTCGCGCGCGTTTGTGCCGCAGCAGCTCGTGTAA
PROTEIN sequence
Length: 655
MSYIKAHFRCIFTIFNLFASCYSEALTVLQASSSSSRPRDRPASLGFTLLPQFGARIPSAADLDAPLAALKHQRSEALKSKRFEGAQNAVTPSALARLSLAVAALPVGKVLTTQPVAFSSHHTANNNSNSNAAVSANANTGSDTSTNVRSSSSSSANASSSANAGASAHEQQQQQQQQQQREQQETILKEQQQLALAAAAAAQTCVSAPLAADTVILRATAYCPKSRVRVLDVLLTDDLPLTALRDCLDCHFDDADAVNWQQQQIHCGYNPYTNNNNSSANGTGDGLVCFLPRAMRFNAHLTAVTHSVITAAQNNNSGSGGSGGNSSVNAESGNEAAAGGAKQKQQQPRTNDGTGRFTTKPKPKQPSNKGKGSKSKGSAMTDNSDDDDDDDDDGDDEFTSAKNAKGKKASAKSKTTAAAAGGGGGSGSKGKAGAKSTASTADAAASATARPYASVPASLVSLSLAAVASDRAPRHLLPHPSAFFFIENTFYDDMRSPSASRLSDPYVTWVGANSRYARPGLAPYKQANMELTPLSALRLRLGAQYLYQHQGDCRHVVIFTEMRMRAPDDLDNRAAYPLVLFRKKAALLKCIICSVHTAVVATVGDRLAPASPAHFCEQCYDALHRDREGKLLYGDYQVFRLLPLSRAFVPQQLV*