ggKbase home page

scnpilot_p_inoc_scaffold_2952_5

Organism: scnpilot_dereplicated_Eukaryote_unknown_16

partial RP 39 / 55 MC: 26 BSCG 17 / 51 MC: 6 ASCG 21 / 38 MC: 8
Location: comp(3854..4468)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; Flags: Fragment;; TaxID=45113 species="Eukaryota; Rhizaria; Cercozoa; Cercomonadida; Cercomona similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 183.0
  • Bit_score: 259
  • Evalue 5.70e-66
DNA-directed RNA polymerase (Fragment) n=1 Tax=Cercomonas sp. ATCC 50319 RepID=Q8MX26_9EUKA similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 183.0
  • Bit_score: 259
  • Evalue 4.10e-66
DNA-directed RNA polymerase subunit A'' similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 157.0
  • Bit_score: 170
  • Evalue 5.30e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cercomonas sp. ATCC 50319 → Cercomonas → Cercomonadida → Eukaryota

Sequences

DNA sequence
Length: 615
TTGGCTCACACATCTTCTACTTTCATCTTCTTTCTCACTCCCATTGACTGCGGTTGCGCTCAACAGGGTGACATTGTGGAGCGCCACATCCAGGACGGCGACTACGTTCTGTTCAACCGCCAGCCGTCACTGCATAAGATGTCTCTGATGTCCCATAAGGCCAAGATCATGCCTCACTCGTCGTTCCGCCTCAACCTGTCGTGCACGTCGCCGTACAACGCCGACTTCGACGGCGACGAAATGAACCTGCACGTGTGCCAGACGCCGCTGACGCGCGCCGAGGCGTGCGAGCTGATGCTAGTGCCGCGGCAGATCGTGTCACCGCAGTCGTCGAAGCCTGTCATGTCGATCGTGCAGGACTCGCTGCTGGGCGTGTCCAAGTTCACGCGCCGCGACACGTTCCTCTCGCGCGCGCTGGCCGCCAACCTGCTCATGTGCATCGACAACTGGAACGGCGCTGTCCCGATCCCGGCCATCCTCAAGCCCGCGCCGCTGTGGACCGGCAAGCAGCTCTTCTCGCTGATTACGCCGCCGCTCAACATCACGCGCCAGTCCAACAACCACCCCGACGGGCAGCGCAGCGAGATTTCTCCCACGGACACCCAGGTAGGTTAG
PROTEIN sequence
Length: 205
LAHTSSTFIFFLTPIDCGCAQQGDIVERHIQDGDYVLFNRQPSLHKMSLMSHKAKIMPHSSFRLNLSCTSPYNADFDGDEMNLHVCQTPLTRAEACELMLVPRQIVSPQSSKPVMSIVQDSLLGVSKFTRRDTFLSRALAANLLMCIDNWNGAVPIPAILKPAPLWTGKQLFSLITPPLNITRQSNNHPDGQRSEISPTDTQVG*