ggKbase home page

scnpilot_p_inoc_scaffold_3728_1

Organism: scnpilot_dereplicated_Eukaryote_unknown_16

partial RP 39 / 55 MC: 26 BSCG 17 / 51 MC: 6 ASCG 21 / 38 MC: 8
Location: 477..2282

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica RepID=K0RCH9_THAOC similarity UNIREF
DB: UNIREF100
  • Identity: 35.9
  • Coverage: 666.0
  • Bit_score: 349
  • Evalue 8.80e-93
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EJK49989.1}; Flags: Fragment;; TaxID=159749 species="Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; similarity UNIPROT
DB: UniProtKB
  • Identity: 36.0
  • Coverage: 666.0
  • Bit_score: 349
  • Evalue 7.20e-93
pabA; polyadenlyte binding protein; K13126 polyadenylate-binding protein similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 630.0
  • Bit_score: 335
  • Evalue 3.20e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thalassiosira oceanica → Thalassiosira → Thalassiosirales → Coscinodiscophyceae → Bacillariophyta → Eukaryota

Sequences

DNA sequence
Length: 1806
TTGAACGAGAAGTTCAGCGCGGCGGGCCAGATCGCGACGATCCGCCTGTGCCGCGACTCGACCACGCGCCGCTCTCTGGGCTACGCCTACGTCAACTACCTCGACCCCGTGTCGGCGCAGAAGGCGTTCGACACGCTCAACTTCTCTGAGATCAAGGGCAAGCAGTGCCGCGTGTGCTGGGTGAACCGCGATTCGTCGCAGCGCCGCTCCGGCCTGGGCAACCTCCACGTTTCGGGCCTCAGCGACAGCGTCGACAACCTCACCCTCTACACGGCTTTCTCCAAGTTCGGCACCGTCCTCTCGTCCAAGATCTGCTACAACCGCGACACGCACAAGCCGCTCGGCTACGCGTTCGTCCAGTTCGAGTCGGATGAGATCGCGCGCGACGTGGTCGAGAACAAGTCCCCCGTCACCGTCGGCGACTCCAAGGCCGTCGTGGCCATGTACAAGCAGCGCAAGGACCGCCAGGCGCAGCGCTTCACCAACATCTACGTGAAGAACCTCCCCGGCTCCTGGACCAAGGAGAAGCTCGACGAGACTTTCTCCCAGTTCGGCAAGATCACCTCCTCCGTGCTTTACAACGCGCGCCCCTCGCCTGCCGCCGCCGCCGCCGCCACCGCCGAGGGCGCTGAGGCTGCTTCCCCCGCGCCTGAGGCCCTCTCTTACGGTTTCGTGTCTTTCGAGACGAACGAGCAGGCGCAGCACGCGATCGAGCGCGCCAACGAGCTCGACGTCGAGGGCCGCCGCGTCTACGCCGCCGCCGCCATCTCCCGCGCCGAACGCGAGCGCTCCAAGCGCGACAACCGCAGTCTGCGCGCGCAGCAGATCAACAGCAAGTCGCTCCACTGCAACCTCTACGTCAAGTTCCTGCCCGAGACGGTCACCGATGACAAGGTCCGCGAGGTCTTCGCGCGCTTCGGCACCATCACCTCGCTCCGCGTCAACCGCACCGCGGACAACGGCCCGTGCACGGGCGTGGCGTTCGTCTGCTACAACGCGCCCGAGGAGGCCAACAAGGCCATCGCGGCGCTGAACCAGTCCCTCGAGTTCGGCGGCGCGGCCCGTCTCTACGTGGCCCTCCACCAGCCTAAGACCCAGCGCCTCGCCCACGGCGGCGCGCACGGCGGCGTCCACGGCGGCCACTTCCGCGGCGGCCTGCCGCCCCACGCCGCGGGCGGCCGCTTCCCGGGCGGCGGCTACGGCGGTTACCCCCAGCAGGGCGGCTACTATGGCGCGCCCTACGGCATGTACCCGGCGATGGGCGGCGCGCGCGGCGGCTTCCGCGGCGGCTACGCGCAGGGTGCGGCCTACGGCATGCACCCGGGGCAGATGATGATGCAGCAGCAGGGCGGCTACGCGCGTGGCCCGCGCGGCGTCCAGGGCGGCGTCCGCGGCGCGGGCATGGGCGGCATGGGCCCCGCAGGCGCGCGCGTGGGCGCCGGGCCCCGCGGCCCGCGCATGGGCGGCGCGTACGGGCAGCAGATGGGCGGCCAGCAGGGCCAGATGCAGCGCCAGCGCCGCCCGCAGCAGCAGCAGCAGCAGCAGCAGCAGGGCGGTGTCGTCGCCGGCGGTTTCGACCTCGCTGCGTTCAACAGCATGCCCGCTGACCAGCGCCGCAACTACCTCGGCGAGCTCGTGTACCCGCTCGTGCAGGCCCTCGACGAGCAGCACGCGCCCAAGATCACCGGTATGATCATCGAGATGGACCACAATGAGGTCATCAAGCTGCTCCACGCGCCCGCCGAGCTTCAGGACAAGGTCGCCGAGGCGCGCCAGGTCCTGCAGGAGGCGGGCACCACCGCGTAA
PROTEIN sequence
Length: 602
LNEKFSAAGQIATIRLCRDSTTRRSLGYAYVNYLDPVSAQKAFDTLNFSEIKGKQCRVCWVNRDSSQRRSGLGNLHVSGLSDSVDNLTLYTAFSKFGTVLSSKICYNRDTHKPLGYAFVQFESDEIARDVVENKSPVTVGDSKAVVAMYKQRKDRQAQRFTNIYVKNLPGSWTKEKLDETFSQFGKITSSVLYNARPSPAAAAAATAEGAEAASPAPEALSYGFVSFETNEQAQHAIERANELDVEGRRVYAAAAISRAERERSKRDNRSLRAQQINSKSLHCNLYVKFLPETVTDDKVREVFARFGTITSLRVNRTADNGPCTGVAFVCYNAPEEANKAIAALNQSLEFGGAARLYVALHQPKTQRLAHGGAHGGVHGGHFRGGLPPHAAGGRFPGGGYGGYPQQGGYYGAPYGMYPAMGGARGGFRGGYAQGAAYGMHPGQMMMQQQGGYARGPRGVQGGVRGAGMGGMGPAGARVGAGPRGPRMGGAYGQQMGGQQGQMQRQRRPQQQQQQQQQGGVVAGGFDLAAFNSMPADQRRNYLGELVYPLVQALDEQHAPKITGMIIEMDHNEVIKLLHAPAELQDKVAEARQVLQEAGTTA*