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scnpilot_p_inoc_scaffold_4340_2

Organism: scnpilot_dereplicated_Eukaryote_unknown_16

partial RP 39 / 55 MC: 26 BSCG 17 / 51 MC: 6 ASCG 21 / 38 MC: 8
Location: 6470..7576

Top 3 Functional Annotations

Value Algorithm Source
rpoD; DNA-directed RNA polymerase, subunit D (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 278.0
  • Bit_score: 137
  • Evalue 9.00e-30
RNA polymerase III subunit n=1 Tax=Polysphondylium pallidum RepID=D3B3A4_POLPA similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 352.0
  • Bit_score: 322
  • Evalue 4.10e-85
  • rbh
DNA-directed RNA polymerases I and III subunit RPAC1 {ECO:0000313|EMBL:JAG30874.1}; TaxID=30085 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 289.0
  • Bit_score: 329
  • Evalue 6.20e-87

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Taxonomy

Lygus hesperus → Lygus → Hemiptera → Neoptera → Arthropoda → Metazoa

Sequences

DNA sequence
Length: 1107
ATGAGCAAGAGCAAGAAGTCGACCAAGTCCACCTCTTCCGCGGACGCCTCCGGCGTGCTCCCGGCGCACCTGCAGGAGATCCGCGACAAGGTCTTCGTTCACTCGACCCACCTCGACCACACCAACGCGGCCGAGGACCCCGATGCGTTCCGCGCCGTCGACTTTGACAACTCGTTCACGCTCGAGGACTTCAAGAAGAAGTTCAAGATTACCGTGATTGAGAAGAGCGACGAGAAGATGGTGTTTGACATGGTTGGCGTCGGTGCGCCCATCGCCAACGCGCTGCGTCGCATCCTCATCTCGGACGTGCCGACGATGGCGATCGAGAAGGTGATCCTGTTCCAGAACACAAGCCTCATCCAGGACGAAGTGCTCGCGCACCGCTTGGGCCTCATCCCCATCAACGCCGACCCGCACAAGTTCAAGTATGTCTCTGAGTGCAACGGCGAGGCCACCGAGGACAACACCACCGTCTTCACGCTCGAAGTCGCCTGCGCGCGCAACCCCAAGGCGGCGCCCTCTGCGCCCCCCGCGCAGGCCTACATCAACGGCGTCGTGTACTCGAACGCGCTTAAGTGGGTGCCGCAGGGCGCGCAGGCGGAGAAGTTCGCGGCCGAGCCCATCGCGCCCGTGCACGACGACATCATCCTCGCCAAGCTGCGCCCCGGACAGAGCATCGAGGCCGAGCTCCACGTCGTCAAGGGCATTGGCCGCGACCACGCCAAGTGGTCCCCCGCCGCCACCGTTTTCTACCGCCAGCTGCCCGACGTGTCCTTCACGGAGCCCTTTTACGGCGCCGAGGCGCAGGCGCTCAAGGCGCTGTGCCCGATGAACGTCTTCGACATCGAGGATCTGGGCAACGGCCCACAGGCCGTGGCGGCGCGCCCGCGCGACTGCACCGTCTGCCGCGAGTGCGTGCGCGAGCCGGAGCGCGAGAAGCGCATCAAGCTGCGCCGCGTGCGCGAGCACTACATCTTCTCCATCGAGAGCGCGGGGCAGATCACACCGGAGACGATGTTCCGCGACGCGCTGATTGAGTTCAAGAAGAAGCTCGGCATCATCTACGCCGACCTCCTCGCCGCCGAGCCCGCTGCCGCCGCCGAGTAA
PROTEIN sequence
Length: 369
MSKSKKSTKSTSSADASGVLPAHLQEIRDKVFVHSTHLDHTNAAEDPDAFRAVDFDNSFTLEDFKKKFKITVIEKSDEKMVFDMVGVGAPIANALRRILISDVPTMAIEKVILFQNTSLIQDEVLAHRLGLIPINADPHKFKYVSECNGEATEDNTTVFTLEVACARNPKAAPSAPPAQAYINGVVYSNALKWVPQGAQAEKFAAEPIAPVHDDIILAKLRPGQSIEAELHVVKGIGRDHAKWSPAATVFYRQLPDVSFTEPFYGAEAQALKALCPMNVFDIEDLGNGPQAVAARPRDCTVCRECVREPEREKRIKLRRVREHYIFSIESAGQITPETMFRDALIEFKKKLGIIYADLLAAEPAAAAE*