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scnpilot_p_inoc_scaffold_4315_6

Organism: scnpilot_dereplicated_Eukaryote_unknown_16

partial RP 39 / 55 MC: 26 BSCG 17 / 51 MC: 6 ASCG 21 / 38 MC: 8
Location: 4930..5193

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendra similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 75.0
  • Bit_score: 65
  • Evalue 3.90e-08
DNA-directed RNA polymerase II subunit, putative; K03010 DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 72.0
  • Bit_score: 62
  • Evalue 5.80e-08
DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9RZ91_RICCO similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 72.0
  • Bit_score: 62
  • Evalue 1.80e-07

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Taxonomy

Tetraselmis sp. GSL018 → Tetraselmis → Chlorodendrales → Chlorodendrophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 264
TTGCCGTGCGGCCTCGCAGATGACGATTACGAGACGATGCCGCGCGTCGATGTCGTGCAGGACGACTCCTGGTCGCTGATCGAGGAGTTTTTCAACTCGCACGGTCTGGTCCGCCACCAGCTCGACTCGTTCAACACGTTCGCCTCCATTACGCTCCAGCAAATCGTCGACGAGTACAACGCGCTTGAGTTCTACCCCAAGCGGTCCTCCCGCAACAATGCCGAGCTCGGACACGTACGTTTCCCCTTCCTATCTTGTCCTTAA
PROTEIN sequence
Length: 88
LPCGLADDDYETMPRVDVVQDDSWSLIEEFFNSHGLVRHQLDSFNTFASITLQQIVDEYNALEFYPKRSSRNNAELGHVRFPFLSCP*