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scnpilot_p_inoc_scaffold_5108_1

Organism: scnpilot_dereplicated_Eukaryote_unknown_16

partial RP 39 / 55 MC: 26 BSCG 17 / 51 MC: 6 ASCG 21 / 38 MC: 8
Location: comp(1..4242)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
UPI0003D09BD0 related cluster n=1 Tax=unknown RepID=UPI0003D09BD0 similarity UNIREF
DB: UNIREF100
  • Identity: 30.5
  • Coverage: 239.0
  • Bit_score: 109
  • Evalue 2.70e-20
Protein Wdr95 {ECO:0000313|Ensembl:ENSRNOP00000057964}; TaxID=10116 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; S similarity UNIPROT
DB: UniProtKB
  • Identity: 31.0
  • Coverage: 213.0
  • Bit_score: 103
  • Evalue 2.80e-18
WD repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 27.5
  • Coverage: 236.0
  • Bit_score: 92
  • Evalue 9.80e-16

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Taxonomy

Rattus norvegicus → Rattus → Rodentia → Mammalia → Chordata → Metazoa

Sequences

DNA sequence
Length: 4242
ATGCTCTCCCAGCGCCGTCCGTTCGCGTCCACGCAGCCTATGCCTGCCGCGGCCGTTGCCACCGACGATGACGCCTTATGGGGCGGCCCGCGCCGCCCGCACGACTTTGTTGTCCTCTCCCCCGAGGCCGTGCGCCGCGCCATTGGCCTGGTCCAACTGAACAAGCTCCAGCGCTACTTCCAGATCGACTCCGCCAACGATGACGGCATCAGCCTCAGCTGCGACGAGTTTGTTGCCGCCCTGGGCTCCGTTCTTATGTCCGCCGCTGCGCGCACGTCGACCAAGTGCCTGCGTATGGTGTTCATGCAGATCGACGCCGACGCCAACGGGTCCGTCGACTGGGCCGAGATCACCTCGTTCATGGTCGTCGACCACCGGGGCCTGGCACCGGAGCCCAGCGTGTACCTCAAGCGGCCCGTCGGCCCCACGCCCCCCGTGCCGCACAGTACGAGCAAGGCGTTTCCCGCCGCTTCGGAGTCGTCCCGCTCGTCCGCCTCGTCTGGCAGCAATGCCAGTAGCAACAAGAGCGGCAGTGGGAGTACTTCTGCCCGCTCGCGCTCGCGCTCATCGACTGCTTCTGCCGTCTACAGCGGCGATTCACACGACGGCACCTTTGACGCAGACGCGGACGCTGACGCTGACGGCGACCATAACGACGACGACAGCAACAACAACGGCGACGGGGACGGCGACGGTGGCGGCGGCGGCGGCGGCGGCGGTGAAAGCTCTGAACGCTCAGGCTCGAGCTTAGCCGGCCGCTCCTGGTGGCGCAACCGCGGCTCCAGCTCCAGCTCCAGCTCTGGCTCCGGCTCTGGGACGCCCCCCACCGGCTCCGGCTCCGGCGGCGTCGGCATTGGCAGCGCGGTTGGCCCCCGGTCGCGCCCGCGCCGACTGCGCCACGCCCCCTCCGCGACCGCGCGCGTCAAGATGGTGACCCCGCCGGTCAACGCCACAATCAACACTCTGTCATCGCAGCACCACGTCGGCATGATTGACGCGCTGCTGACGCTGCCATCGGGACACCTGATCACGGGTGGCCGCGACGGCACCGTCCGAGTCTGGCGCCCGCCCGTGACCCCCGAGGCCGCGGCCGCGCCGCCGACCCACATCCTCCACGTCGCGTCCGAGTCGCTGCGGTCCTCCATGCCGCTGTCGCTGCTCTCGGGCGGGCCCGCGGGCGCGCTGTCCGCCGCCCTGACCGGCGACGGCGGCTCAGGCACCGCCGCTCTCGGCGCCGGCGCCGGCGCGGGCGGCGCGGGCGCCGGGGCCGCGGCAGCGGGGCGGCGGCGGCCTGACTCGCTCGCCCTCCGCGACCCGTCCACCACGTTTCCCTCGCTGTCCACCTCTCTTTCTAGCAGCAGCAGCGGCGGCAGCGCGAACGCGTTCGGCGGCGTAGGGCGCAAGGGGTTCTACTCGCGCAGCGGCGTGGGCGCGCCGCAGAGCTACCTCGGCGGCGTTGGCCCCCGCAGTGGTGGCGTCAAGGCCGAGGCGCCCGCGCCCGGGTACCTTCCGGGCGGGCTCTCCGCCAGCGCGCTCAGCGCCGGGCTAGGCCGCAGTCTCGGCGGCAACGGCAGCGGGACTGGTACCGGCGCCGACGCCACGCCGCCGCGCGTGACGCACGTGCCCGTCGCGGGTGGCGCAGGGCACATTCTGATTACTGCGATGGCAACGCTGCCGCTGAGCAACAATCTTGTTGTGTGCTCGAGCGACTGCGTGGTCACGTTCGTCGACATCGCCACGATGAAGATCACTTCGCGCATCCGCGACTTCGGCTCCGTGCACGTGTTCACCGAGCCCATCACCGCCGCGCTTGGCCTCGCGCTCTACGGACAGGACCTGCTGCTGCTCGGCGACGACTGCGGCCGCATCCACCTGCTCCGGTTCCACGACAAGAACTGGTTTATCCACGACGCCACGCTCACCATCCAGGCCCGCGAGGCGGCCGCCGCGGCGCCGGCGACGTTCGAGGCCGCCGTGGCTGCGGCGTCGGCGGCCACGGGCGCCGGCGGGCTTGACGATCTCTCTGGCAACAACGGCTCCGGCGGCGGGAACAACGACGACGACGGCGGCCGGTACGATCCGTACTACAGCAACAGCGGCGGCGGCAGCGGCGGCTCGGCTATCGCGCGCTCCGGCGGCAGCGGCGGCAGCGCTGCTGGCGGCGGCGGCGGCGGCGGTGGCGGTGGCGGCGGTGGCAGCATTGGCGCGGGCCCTCAGGTCACCGCTATCCCCGGCTCGATCGACTCCGCGGATGCGCCGCACGCGCCGCTGCCGCCGTCTGTGGCCGCGGTGCTGGCCGCGAGCGCCGCGATGCCGCCCGGGCCGCCGCAATGGCACGGCGTCAGCCGCTACCGCGTGCGGCTGCACTTCCCGCGCGTGCGCACGGACATGACCGCGGTCTCCACGGCCACGGCGACGGCCACTGCCAGCACGGGCGGCCCCGGCGCCGCGGCGGGCTCTGGCACGGGCGCGGGCGCGGGCGCTGGCAAGGTTGCGTCGGTCGCCACCGTGACCGACGGCTCGTTCAAGTACTTGGAGACGCAGTCCACCACCATCACGGCCACGAACAACAGCCTCAACACGAGTCTCAACGGCAGCACCGGCGCGACGAGCCGCTTCGCGCCGTTCAACTCGCGGCAGGACGAGGCGCTGTTCCGCGCCATCAGCGACCACCCGTGCGCTATCACCGACATCAAGTATTCGCCGCAGCTCGACGTCTTCGTGTCGGCTAGCGCGGACGGCACTGTGAAGCAGTTCGACATCACGCGCATTCCGTCCGTGCGTGCGGGCCCAGGCGCGTGCGTCGGCGGGGCCGGGTTCGGCGCCGTCGGCACCGCCACCTCCGCGGCGTCGGCCTCGGCCGCTGCCGCCGCTGCCGCTGCCGCCGCCGCGGTCGCCGCCGCCGCTGCCGAGACCGCTGCCGTTGCGGGGACGCTTGTCGCCAGCGCCAACGCCGCCGCCGCCGCCGCTGCTGCGAACACCGCGGCCGCCGTGGCCGCCGCGGCCGCCGCTGCCGGTGGCGGCGCCGGCGCGGGCGGGGACGACGACGGCTCCGACCCGTCGCGGCCCGTGCTGCGCGAGCCCTGCTGCGTGCGGCGCGTGTTCCTGGGTCACACGCGCGCGGTGCACACCGTGGCGCTGTCGCCGAGCATGAAAATCGCGGTCAGCGCCGGCCTGGACCGGTCCGTGTGCGTGTGGGACCTGTACAACCTGCAGGTCATCACCACGCTCACGGGCTTTCAGGCCCCGCTGGAGCTCGTGGCCGTCGACGAGCTCGCCCGCATCATCATCGCCGTCGCCGCAGACAAGGCTGTGCGCGTGTACGACATCGCGATCGGCTACGTGTGCGTGCACTCGAAGCCCGCGGCGGTCAAGTGCTTCCCGCAGGACTGCTTCTCGGCCGCCGCGTACGACAGCTATAACCGGCGCCTCGTGGCCGCGCACTCGCGCATCTGCGCCATGGAGATCGTGGTGCTTGCGACGCGGCCGCCCAAGTCGCACCGCAGTCCCGTGATCGCGGTGTGCTATAACAAACAGTTCAACCAGCTCATCACGGCCGACGAGGCCTCCGGTGTGTCGATCTGGGACATCGAGACCGGCAAGGTACTCTCACGCTTCGAGGCCAGTGTGCCGCTCGCAGCGATGTGCCTTGACTCGAACGAGCGCAGGCTGCTAATGGGCGGGCAGGACGGTTCGCTGCAGATGTACAACTTCAGTAACGGGCAGAAGCTGACCGAGTTTACGACGGAGATCCTTGTCCATGAGGAGGAGGACTACCACGCGTCTCTCGCCTCCAGCAATAACAACAGTAGCATGAACAACAACAGCTCAAATTCTAGTTCGACTTCTAATGCGGGTGTGCCGGCTCCCAGTAGTGGTGCGGCGGAGACTGTTAGCAGCAGCGGTGCATCGGCGACGCGGTCCAATGCGCTGATGATGCTGCAACAGCAGCAGGCCCTGCAAGACACTCTTGCTGCCAGTTCAAGTGCTAATTCGAACTCTAGCACTGCGAACTCCTCCCGCAACCCCGCTACTTTGACTGCAACCAACGCTGTAGCTCCTAGCTCAGGCTCGAACGCACACGCGGCTGCCGGCGCGACGGGGAACAACAGCAACAGTCGACGCCGCCGCCCGACGACCTCGCGCGACATCAGCGCCGTGGTGTACATCGAGTCGCCCGCACACTCGAGCACGCGCTACAAGCTGGCCATCACAACTGGCTGGGACCGGCGCGTGCACGCT
PROTEIN sequence
Length: 1414
MLSQRRPFASTQPMPAAAVATDDDALWGGPRRPHDFVVLSPEAVRRAIGLVQLNKLQRYFQIDSANDDGISLSCDEFVAALGSVLMSAAARTSTKCLRMVFMQIDADANGSVDWAEITSFMVVDHRGLAPEPSVYLKRPVGPTPPVPHSTSKAFPAASESSRSSASSGSNASSNKSGSGSTSARSRSRSSTASAVYSGDSHDGTFDADADADADGDHNDDDSNNNGDGDGDGGGGGGGGGESSERSGSSLAGRSWWRNRGSSSSSSSGSGSGTPPTGSGSGGVGIGSAVGPRSRPRRLRHAPSATARVKMVTPPVNATINTLSSQHHVGMIDALLTLPSGHLITGGRDGTVRVWRPPVTPEAAAAPPTHILHVASESLRSSMPLSLLSGGPAGALSAALTGDGGSGTAALGAGAGAGGAGAGAAAAGRRRPDSLALRDPSTTFPSLSTSLSSSSSGGSANAFGGVGRKGFYSRSGVGAPQSYLGGVGPRSGGVKAEAPAPGYLPGGLSASALSAGLGRSLGGNGSGTGTGADATPPRVTHVPVAGGAGHILITAMATLPLSNNLVVCSSDCVVTFVDIATMKITSRIRDFGSVHVFTEPITAALGLALYGQDLLLLGDDCGRIHLLRFHDKNWFIHDATLTIQAREAAAAAPATFEAAVAAASAATGAGGLDDLSGNNGSGGGNNDDDGGRYDPYYSNSGGGSGGSAIARSGGSGGSAAGGGGGGGGGGGGGSIGAGPQVTAIPGSIDSADAPHAPLPPSVAAVLAASAAMPPGPPQWHGVSRYRVRLHFPRVRTDMTAVSTATATATASTGGPGAAAGSGTGAGAGAGKVASVATVTDGSFKYLETQSTTITATNNSLNTSLNGSTGATSRFAPFNSRQDEALFRAISDHPCAITDIKYSPQLDVFVSASADGTVKQFDITRIPSVRAGPGACVGGAGFGAVGTATSAASASAAAAAAAAAAAVAAAAAETAAVAGTLVASANAAAAAAAANTAAAVAAAAAAAGGGAGAGGDDDGSDPSRPVLREPCCVRRVFLGHTRAVHTVALSPSMKIAVSAGLDRSVCVWDLYNLQVITTLTGFQAPLELVAVDELARIIIAVAADKAVRVYDIAIGYVCVHSKPAAVKCFPQDCFSAAAYDSYNRRLVAAHSRICAMEIVVLATRPPKSHRSPVIAVCYNKQFNQLITADEASGVSIWDIETGKVLSRFEASVPLAAMCLDSNERRLLMGGQDGSLQMYNFSNGQKLTEFTTEILVHEEEDYHASLASSNNNSSMNNNSSNSSSTSNAGVPAPSSGAAETVSSSGASATRSNALMMLQQQQALQDTLAASSSANSNSSTANSSRNPATLTATNAVAPSSGSNAHAAAGATGNNSNSRRRRPTTSRDISAVVYIESPAHSSTRYKLAITTGWDRRVHA