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scnpilot_p_inoc_scaffold_5001_2

Organism: scnpilot_dereplicated_Eukaryote_unknown_16

partial RP 39 / 55 MC: 26 BSCG 17 / 51 MC: 6 ASCG 21 / 38 MC: 8
Location: comp(1923..2171)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WMW5_9STRA similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 77.0
  • Bit_score: 107
  • Evalue 8.00e-21
Suspect SCG annotation. See neighboring gene [scnpilot_p_inoc_scaffold_5001_1]. split_gene in-house
  • Identity: null
  • Coverage: null
  • Bit_score: null
Albugo candida WGS project CAIX00000000 data, strain Ac Nc2, contig AcNc2_CONTIG_86_length_80991 {ECO:0000313|EMBL:CCI45015.1}; TaxID=65357 species="Eukaryota; Stramenopiles; Oomycetes; Albuginales; A similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 74.0
  • Bit_score: 108
  • Evalue 3.80e-21

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Taxonomy

Albugo candida → Albugo → Albuginales → Eukaryota

Sequences

DNA sequence
Length: 249
ATGAGTAAGGTGATCAAGCAGTCCTGGCATTTGTTCGACGCCAAGTCGCAGATCGTCGGCCGCCTCTCCCAGCACGTCGCCACTGTGCTCATGGGCAAGCACAAGCCCACCTACACCCCCAACGTCGACTGCGGCGACACCGTTGTCGTCGTCAACGTCAAGGACATCAAGTTCACTGGCCGCAAGTGGGACCAGAAGATCTACCGTCGCCACACTGGGTACGTACATCCCTTCTCGCCTCCACGCTGA
PROTEIN sequence
Length: 83
MSKVIKQSWHLFDAKSQIVGRLSQHVATVLMGKHKPTYTPNVDCGDTVVVVNVKDIKFTGRKWDQKIYRRHTGYVHPFSPPR*