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scnpilot_p_inoc_scaffold_5700_4

Organism: scnpilot_dereplicated_Eukaryote_unknown_16

partial RP 39 / 55 MC: 26 BSCG 17 / 51 MC: 6 ASCG 21 / 38 MC: 8
Location: comp(2571..2966)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein (Fragment) n=1 Tax=Capsella rubella RepID=R0H9L0_9BRAS similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 67.0
  • Bit_score: 81
  • Evalue 9.80e-13
Uncharacterized protein {ECO:0000313|EMBL:EOA21645.1}; Flags: Fragment;; TaxID=81985 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyl similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 67.0
  • Bit_score: 81
  • Evalue 1.40e-12
ribosomal protein S13p/S18e, putative similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 55.0
  • Bit_score: 79
  • Evalue 1.20e-12

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Taxonomy

Capsella rubella → Capsella → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 396
ATGTCTTTATCCGCTGCCCCTTCCCCCCTGCACACACAGGCTCTTATCGTCGAGGACGCTGACTTCAAGCACATCCTCCGTATTCTCAACACCAACATCCACGGCAAGGAGAAGGTCGTCTATGCCCTCACCGAGATCCGTGGTGTCGGCCGCCGCTTCGCTGACATCGCTTGCAAGCGCGCCAACGTCGACTCCAAGAAGCGGTACGTCTACGCCTACAACGCTTTTCCCAGTCAGCAGCGAAGCAACCTCTCGCTCTGGTCCTGCCGCGCTCCTGTAGATGAATGTCGCTGCTCTCTCTACGCTCCTCAACGCATCAGTCTCACTCACTTTTCTCCCATTGTTCTTCCGCCTTTCTTTTGTCCCCTTGTTTTCCCTCCCCCGCAGCGCTGGTGA
PROTEIN sequence
Length: 132
MSLSAAPSPLHTQALIVEDADFKHILRILNTNIHGKEKVVYALTEIRGVGRRFADIACKRANVDSKKRYVYAYNAFPSQQRSNLSLWSCRAPVDECRCSLYAPQRISLTHFSPIVLPPFFCPLVFPPPQRW*