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scnpilot_p_inoc_scaffold_6037_5

Organism: scnpilot_dereplicated_Eukaryote_unknown_16

partial RP 39 / 55 MC: 26 BSCG 17 / 51 MC: 6 ASCG 21 / 38 MC: 8
Location: comp(4496..5203)

Top 3 Functional Annotations

Value Algorithm Source
Putative S1 RNA binding domain protein n=1 Tax=Trichinella spiralis RepID=E5S8Z9_TRISP similarity UNIREF
DB: UNIREF100
  • Identity: 31.7
  • Coverage: 139.0
  • Bit_score: 67
  • Evalue 2.60e-08
Uncharacterized protein {ECO:0000313|EMBL:ETO05846.1}; TaxID=46433 species="Eukaryota; Rhizaria; Foraminifera; Monothalamids; Reticulomyxidae; Reticulomyxa.;" source="Reticulomyxa filosa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.8
  • Coverage: 92.0
  • Bit_score: 72
  • Evalue 1.10e-09
putative S1 RNA binding domain protein; K14792 rRNA biogenesis protein RRP5 similarity KEGG
DB: KEGG
  • Identity: 31.7
  • Coverage: 139.0
  • Bit_score: 67
  • Evalue 8.20e-09

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Taxonomy

Reticulomyxa filosa → Reticulomyxa → Eukaryota

Sequences

DNA sequence
Length: 708
ATGCGTACTGACGAGCGTTCCAGCGCGCTGCATGTCTTCTCTCACTTCCCGCTCCCCGCCGTTGTCTCACTCCCCCTCTCGCCGCTCCCACCGACCACTTGCTCCGCTTCCCGAACTCCAGTCCACCAGCCCGCGCAGCCCATGGTGTCCTTCCCGCCCGCGTCCTGCGTTGCGGCCTCGCGCTTTGTGTCGCCGCGGTCCCGCTCCTCTGGCGGCCTGATTTCCCTCCTCGCTCTTGTCGTGGTATGCGCGCTTGCTCTGTTCGTCACTCCCGCCGAGGCCGTGCGTCGCCGTCCTACCAAGATGTCCAACAACCCCGTCTCAACGCAGTACACGCCCGAGCCGCACCACTCGCTTCACGCCCCCATGGACACGTCGCAGTCGTACTTCACTTTCGGCGGCTCCACTGTCGCGACGAAGAAGTACATGCGTCTTACTCCCTCCACCCAGGACCGTAAGGGATTCGTCTGGAATGAGTATCCCATGGAGTCGGACGACTTTGAGGTTGAGGTCAAGCTTGAGATTTTCTCTACGCCACACTTTGGTGGTGATGGTATGGGTATTTGGTTCCTGAATGCTGAGCAGGATCCCTCCGTTTCGTCCGAGCCTTCCGCTCTTCAGGTGCGTTCCTTACTTCTTCTTCCAACTCATATAGCTCCACGACATATACTCTCCTCCAGAAATGTCGCTGATGTTAAGTTATCATAA
PROTEIN sequence
Length: 236
MRTDERSSALHVFSHFPLPAVVSLPLSPLPPTTCSASRTPVHQPAQPMVSFPPASCVAASRFVSPRSRSSGGLISLLALVVVCALALFVTPAEAVRRRPTKMSNNPVSTQYTPEPHHSLHAPMDTSQSYFTFGGSTVATKKYMRLTPSTQDRKGFVWNEYPMESDDFEVEVKLEIFSTPHFGGDGMGIWFLNAEQDPSVSSEPSALQVRSLLLLPTHIAPRHILSSRNVADVKLS*