ggKbase home page

scnpilot_p_inoc_scaffold_7850_2

Organism: scnpilot_dereplicated_Eukaryote_unknown_16

partial RP 39 / 55 MC: 26 BSCG 17 / 51 MC: 6 ASCG 21 / 38 MC: 8
Location: 1839..2258

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase II subunit H {ECO:0000313|EMBL:EME31725.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EME31725.1};; TaxID=130081 species="Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 122.0
  • Bit_score: 104
  • Evalue 1.60e-19
DNA-directed RNA polymerase II subunit H n=1 Tax=Galdieria sulphuraria RepID=M2X5F5_GALSU similarity UNIREF
DB: UNIREF100
  • Identity: 43.4
  • Coverage: 122.0
  • Bit_score: 104
  • Evalue 1.10e-19
hypothetical protein; K03016 DNA-directed RNA polymerases I, II, and III subunit RPABC3 similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 121.0
  • Bit_score: 101
  • Evalue 2.30e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Galdieria sulphuraria → Galdieria → Cyanidiales → Bangiophyceae → Eukaryota

Sequences

DNA sequence
Length: 420
ATGTTTGCTTTTGTCCCGCTTGTGCGCTTGCCTCTTCTGTCTGCAGTGTCGCGCATGGTGTGCCGTGGTGAGAACTTCGACACACAGATGGTGTGCGACTACAACTGCGAGATCTACCCGCTCAAGGAAGAGGGCCGGCTCGAGGTGCTCATGACGTCCTCGCTCGCCGACGACGGCCGCGTCGACAGCGAGTACAACCCGCAGCTGCAGTCGAAGCTGCTGGACGACTACGAGTACGTGATGCACGGCAAGGTCTTTAAGGTCAAGCACCCCGAGAAGGCCAATGCCGACCTCGAGGTCTTCATCTCCTATGGCGGGCTCCTCATGTCGCTTAAGGGCAAGCCGCAGACGCTGGACCGCATCGAGCTTGACTCCAAGGTCTACCTTCTCATGCGCCGTGTCAAGGACGCCGCCTTCTGA
PROTEIN sequence
Length: 140
MFAFVPLVRLPLLSAVSRMVCRGENFDTQMVCDYNCEIYPLKEEGRLEVLMTSSLADDGRVDSEYNPQLQSKLLDDYEYVMHGKVFKVKHPEKANADLEVFISYGGLLMSLKGKPQTLDRIELDSKVYLLMRRVKDAAF*