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scnpilot_p_inoc_scaffold_8281_4

Organism: scnpilot_dereplicated_Eukaryote_unknown_16

partial RP 39 / 55 MC: 26 BSCG 17 / 51 MC: 6 ASCG 21 / 38 MC: 8
Location: 3501..3938

Top 3 Functional Annotations

Value Algorithm Source
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 (Fragment) n=1 Tax=Nannochloropsis gaditana CCMP526 RepID=I2CQU7_9STRA similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 127.0
  • Bit_score: 181
  • Evalue 4.50e-43
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 {ECO:0000313|EMBL:KFM25566.1}; TaxID=3075 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxen similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 127.0
  • Bit_score: 185
  • Evalue 7.40e-44
ATP-dependent RNA helicase HrpA similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 145.0
  • Bit_score: 128
  • Evalue 1.30e-27

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Taxonomy

Auxenochlorella protothecoides → Auxenochlorella → Chlorellales → Trebouxiophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 438
ATGACGGACGGCATGCTGCTCCGCGAGTTCCTGACGAACCCTGACCTGGACCGCTACTCGGCGCTCATTATGGACGAGGCGCACGAGCGCTCGCTCAATACGGATGTGCTCTTCGGCCTGCTCAAGCAGGTCTGCGCGCGCCGCGCCGACCTGCGCCTCGTCGTCACCTCGGCCACACTCGACGCCGAGCGCTTCGCGCGCTTCTTCGGCGGCGCGCCCGTGTTCGAAATCCCGGGCCGCACGTTCCCCGTGGCCGTGGAGCACGCGCAGGCGATGCGCGAAGACTACGTCAAGGCCACGGTGACGCAGGCGCTCACGGTCCACATCGCTCACCCGCCAGGGGACATTCTCTGCTTCATGACCGGACAGGTACGTGTACAAGAGGGCATCTGGATATTTCGACTGGATAATATGATTATTAGTATGTATAATTTGTGA
PROTEIN sequence
Length: 146
MTDGMLLREFLTNPDLDRYSALIMDEAHERSLNTDVLFGLLKQVCARRADLRLVVTSATLDAERFARFFGGAPVFEIPGRTFPVAVEHAQAMREDYVKATVTQALTVHIAHPPGDILCFMTGQVRVQEGIWIFRLDNMIISMYNL*