ggKbase home page

scnpilot_p_inoc_scaffold_11447_4

Organism: scnpilot_dereplicated_Eukaryote_unknown_16

partial RP 39 / 55 MC: 26 BSCG 17 / 51 MC: 6 ASCG 21 / 38 MC: 8
Location: comp(3250..3612)

Top 3 Functional Annotations

Value Algorithm Source
Similar to Probable small nuclear ribonucleoprotein Sm D1 acc. no. Q9VU02 n=1 Tax=Pyronema omphalodes (strain CBS 100304) RepID=U4LT65_PYROM similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 108.0
  • Bit_score: 112
  • Evalue 2.80e-22
Putative MFS sugar transporter {ECO:0000313|EMBL:ESZ99519.1}; TaxID=1432307 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 121.0
  • Bit_score: 120
  • Evalue 1.40e-24
DNA/RNA helicase similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 124.0
  • Bit_score: 75
  • Evalue 1.40e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sclerotinia borealis → Sclerotinia → Helotiales → Leotiomycetes → Ascomycota → Fungi

Sequences

DNA sequence
Length: 363
GTGGGCGTCGACCACTCGATGAACACGCACCTCAAGGACGTCAAGTGCGTCGTAAAGAACCGCAACCCGACCGAGCTCAAGACGCTCTCAGTCCGCGGCAGCACGATCCGCTACTACCTGCTCCCCGACTCGCTCAACCTCGACGCGCTGCTCGAGGAGGCCGAGAAGAAGGCCAACAAGGTTGCCGCCACGGCCAGCGCGCGCGCGGGCGGCGCCGGCGGCCGCAGCGGCGGCCGGGGCGGCGCCGGCGGCCGTGGTGGTGCCAGTGGCCGCGGCGGCGGTCGCGGCGGCCGCGGCGGCGGCGGCGACAGGGGCGGCCGCGGCGGCCGTGGTGGCCGTGGCGGTGGCCGCGGCCGCAACTAA
PROTEIN sequence
Length: 121
VGVDHSMNTHLKDVKCVVKNRNPTELKTLSVRGSTIRYYLLPDSLNLDALLEEAEKKANKVAATASARAGGAGGRSGGRGGAGGRGGASGRGGGRGGRGGGGDRGGRGGRGGRGGGRGRN*