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scnpilot_p_inoc_scaffold_12356_3

Organism: scnpilot_dereplicated_Eukaryote_unknown_16

partial RP 39 / 55 MC: 26 BSCG 17 / 51 MC: 6 ASCG 21 / 38 MC: 8
Location: 1716..3128

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GND7_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 452.0
  • Bit_score: 619
  • Evalue 2.10e-174
  • rbh
RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 452.0
  • Bit_score: 619
  • Evalue 5.90e-175
  • rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimon similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 452.0
  • Bit_score: 619
  • Evalue 2.90e-174

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Taxonomy

Pusillimonas sp. T7-7 → Pusillimonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
ATGCATTCGCGTCAATCTTTAGAGCTACGGCAGCATCAGCACCTGGCGCTGACCCCGCAATTGCAGCAATCCATAAAATTCCTGCAATTGTCCACTCACGAGCTCGAACTGGAAGTGGCCCAGGCCCTGCTGGACAACCCTCTGCTCGAACGTGAGGAAGAGTATGACACTGTTGCGCCCGATGCGGTAGCGGACGAGGCCCAATCCCAGGACGAGCGCTGGATGTCCGTGGACGCCGGGCCCCGGGCGTCCGCCGGCTCCGCCGACGACGAGCCCGTTCGTCCCGAAGCCGCCCTGGAAGAGACGCTGCAGGAGCATTTGCTGCAGCAACTGCGCCTGACGCGCGCCGGCCCGCGCGACATGGCGCTGGCCTCGATACTGATCGAAGAGCTGGACGACAAGGGCTATTTGCCGACCGCGCTCGAAGACGTGCTCGCCTGCCTGCCGCCCGAGCTGGGGGTCGAGCTCGACGAGCTGCAGGCCGCGCTGGCCCTGGTGCAATCCTTCGACCCGCCCGGCGTCGGCGCCCGGTCGCTCGATGAATGCCTGTGCCTGCAGCTTGCCCAGCTGTCCCGTCACCGCGCGGGCGGCGGCGAACCCGACGAGGTCTTTCGGCTGGCGAGCGAAATCGCCAAGGAGCACCTGCCGCTGCTGGCTTCCGGCAATCTGGCCCGGCTGCGGGCCGCGCTGGGCTGCGAGCAGGAGGTCCTGCGGGCGGCGCACGGCCTGCTTTTGCGGCTGGAGCCCAGGCCCGGCAGGCATTGGGCCACCAAGCTGGCCGATTACATCACGCCCGACGTCTTGATCAGGAAGTCGCGCAACCGCTGGGTCGCCAGCGTGAATCCCGCCGTCATGCCCAGGCTCAGGGTCAATCCGGTATACCAGGAACTGCTGGACGAATCCCCTCCCGCGCCCGCCATGCACTCGCAGCTGCAGCAGGCGCAAGGCCTGATCAAAAGCGTGAACCAGCGCTTCGTCACCATTTTGCGGGTGGCCCAGGCGGTGGTCGACAAGCAGCACGATTATTTCGAGCGCGGCGTCGGCGCCATGCGGCCGCTGGTGCTGCGCGACATCGCCCAGGAGCTCGACCTGCACGAGTCCACCGTCTCGCGCGCGACGAAGCACAAGTATGCCCAGACGCCCTGGGGCGTGATCGAACTGCGGCGCTTCTTCGGCGCCGCGCTGCAGACGGAGGACGGCGCATCCACCTCGGCGACGGCCGTGCGTTCGCTGATCGTCAAGCTGGTCAGTGAAGAATCCGGCAAAAAGCCTTTGTCGGACAATCAATTGGCGCTCAAGCTGGCCGAACAGGGCATCGTCATCGCCCGCCGCACCGTGGCCAAATACCGGGAAGCCGCCGGCATAGAACCGGCCATCCTGCGCAAGGCCAGGGCCGCGCTCGAGCGCGCCTGA
PROTEIN sequence
Length: 471
MHSRQSLELRQHQHLALTPQLQQSIKFLQLSTHELELEVAQALLDNPLLEREEEYDTVAPDAVADEAQSQDERWMSVDAGPRASAGSADDEPVRPEAALEETLQEHLLQQLRLTRAGPRDMALASILIEELDDKGYLPTALEDVLACLPPELGVELDELQAALALVQSFDPPGVGARSLDECLCLQLAQLSRHRAGGGEPDEVFRLASEIAKEHLPLLASGNLARLRAALGCEQEVLRAAHGLLLRLEPRPGRHWATKLADYITPDVLIRKSRNRWVASVNPAVMPRLRVNPVYQELLDESPPAPAMHSQLQQAQGLIKSVNQRFVTILRVAQAVVDKQHDYFERGVGAMRPLVLRDIAQELDLHESTVSRATKHKYAQTPWGVIELRRFFGAALQTEDGASTSATAVRSLIVKLVSEESGKKPLSDNQLALKLAEQGIVIARRTVAKYREAAGIEPAILRKARAALERA*