ggKbase home page

scnpilot_p_inoc_scaffold_54_curated

Search features with annotation key words

Displaying items 1-30 of 289 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_54_curated_1
Bacteroidetes oral taxon 274, Bacteroidetes, Bacteria

Not on your lists

comp(1..270)
DNA (270bp) protein (90aa)
Lysyl endopeptidase (Lys-C) n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JEZ0_9BACT
Lysyl endopeptidase (Lys-C) {ECO:0000313|EMBL:EFI16801.1}; TaxID=575590 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes oral taxon 274 str. F0058.;"
scnpilot_p_inoc_scaffold_54_curated_2
unknown

Not on your lists

comp(285..707)
DNA (423bp) protein (141aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_54_curated_3
unknown

Not on your lists

comp(821..1267)
DNA (447bp) protein (149aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_54_curated_4
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1276..2691)
DNA (1416bp) protein (472aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RS70_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ16722.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_p_inoc_scaffold_54_curated_5
unknown

Not on your lists

comp(2688..3149)
DNA (462bp) protein (154aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_54_curated_6
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3156..3332)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VJW9_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK58571.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
scnpilot_p_inoc_scaffold_54_curated_7
unknown

Not on your lists

comp(3313..3792)
DNA (480bp) protein (160aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_54_curated_8
unknown

Not on your lists

comp(3789..4517)
DNA (729bp) protein (243aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_54_curated_9
unknown

Not on your lists

comp(4498..4986)
DNA (489bp) protein (163aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_54_curated_10
unknown

Not on your lists

comp(4983..6602)
DNA (1620bp) protein (540aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_54_curated_11
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6599..8266)
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8K1Q9_9BACT
hypothetical protein
Tax=GWA2_Bacteroidetes_30_7_curated
scnpilot_p_inoc_scaffold_54_curated_12
Ornithobacterium rhinotracheale, Ornithobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8582..9043
DNA (462bp) protein (154aa)
Rrf2 family protein, putative transcriptional regulator n=1 Tax=Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / LMG 9086) RepID=I3ZYP3_ORNRL
Rrf2 family transcriptional regulator
Rrf2 family protein, putative transcriptional regulator {ECO:0000313|EMBL:AFL96827.1}; TaxID=867902 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Ornithobacterium.;" source="Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG; 23171 / LMG 9086).;"
scnpilot_p_inoc_scaffold_54_curated_13
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9070..9510
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RVD2_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ16118.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_p_inoc_scaffold_54_curated_14
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9507..10412
DNA (906bp) protein (302aa)
tryptophan 23-dioxygenase; K00453 tryptophan 2,3-dioxygenase [EC:1.13.11.11]
Tryptophan 23-dioxygenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9I2_FLUTR
Tryptophan 23-dioxygenase {ECO:0000313|EMBL:AEA45163.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_54_curated_15
Ancylostoma ceylanicum, Ancylostoma, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

10429..11199
DNA (771bp) protein (257aa)
Putative RNA methylase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YTB3_AEQSU
Methyltransferase domain protein {ECO:0000313|EMBL:EPB65864.1}; TaxID=53326 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma.;" source="Ancylostoma ceylanicum.;"
putative RNA methylase
scnpilot_p_inoc_scaffold_54_curated_16
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11218..11949
DNA (732bp) protein (244aa)
Iron-sulfur cluster repair di-iron protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RVD3_LEAB4
iron-sulfur cluster repair di-iron protein; K07322 regulator of cell morphogenesis and NO signaling
Iron-sulfur cluster repair di-iron protein {ECO:0000313|EMBL:ADQ16119.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_p_inoc_scaffold_54_curated_17
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12010..12537
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00037F8CB4
Azurin {ECO:0000313|EMBL:CEN48599.1}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
azurin
scnpilot_p_inoc_scaffold_54_curated_18
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12658..13746)
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000374EBA9
peptidase M48 Ste24p
Peptidase M48 Ste24p {ECO:0000313|EMBL:AEE52102.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_p_inoc_scaffold_54_curated_19
unknown

Not on your lists

13845..14192
DNA (348bp) protein (116aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_54_curated_20
unknown

Not on your lists

14192..14506
DNA (315bp) protein (105aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_54_curated_21
unknown

Not on your lists

14592..15398
DNA (807bp) protein (269aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_54_curated_22
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15683..17365
DNA (1683bp) protein (561aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Transcription termination factor Rho n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLF9_CHIPD
transcription termination factor Rho; K03628 transcription termination factor Rho
scnpilot_p_inoc_scaffold_54_curated_23
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17389..18741)
DNA (1353bp) protein (451aa)
Mg-chelatase subunit ChlD id=1890379 bin=GWB2_Bacteroidetes_32_14 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
Mg-chelatase subunit ChlD
Tax=GWE2_Bacteroidetes_32_14_curated
scnpilot_p_inoc_scaffold_54_curated_24
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

comp(18784..19935)
DNA (1152bp) protein (384aa)
Putative aminopeptidase id=4698697 bin=GWC2_Tenericute_34_14 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Tenericute_34_14 organism_group=Tenericutes organism_desc=Good +
peptidase M28
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
scnpilot_p_inoc_scaffold_54_curated_25
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19932..20378)
DNA (447bp) protein (149aa)
Putative membrane protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CKR7_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EOC99320.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_54_curated_26
uncultured Flavobacteriia bacterium, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20552..21394
DNA (843bp) protein (281aa)
TPR repeat-containing protein n=1 Tax=uncultured Flavobacteriia bacterium RepID=H6RG86_9BACT
TPR repeat-containing protein {ECO:0000313|EMBL:CCG00047.1}; TaxID=212695 species="Bacteria; Bacteroidetes; Flavobacteriia; environmental samples.;" source="uncultured Flavobacteriia bacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_54_curated_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21737..23281
DNA (1545bp) protein (515aa)
ribonuclease, Rne/Rng family; K08301 ribonuclease G [EC:3.1.26.-]
Ribonuclease, Rne/Rng family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNU1_NIAKG
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:AEW02026.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_54_curated_28
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23429..23707
DNA (279bp) protein (93aa)
10 kDa chaperonin n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI90_CHIPD
chaperonin Cpn10; K04078 chaperonin GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_54_curated_29
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23781..25412
DNA (1632bp) protein (544aa)
molecular chaperone GroEL n=1 Tax=Segetibacter koreensis RepID=UPI000366B2C7
chaperonin GroEL; K04077 chaperonin GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_54_curated_30
unknown

Not on your lists

comp(25492..25926)
DNA (435bp) protein (145aa)

This feature has no annotations

Displaying items 1-30 of 289 in total

View Taxonomy