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scnpilot_p_inoc_scaffold_54_curated_103

Organism: scnpilot_dereplicated_Bacteroidetes_5

near complete RP 52 / 55 BSCG 50 / 51 ASCG 14 / 38
Location: 110706..111353

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NM26_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 61.9
  • Coverage: 215.0
  • Bit_score: 284
  • Evalue 7.30e-74
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KGO09917.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 215.0
  • Bit_score: 295
  • Evalue 5.80e-77
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 216.0
  • Bit_score: 168
  • Evalue 2.40e-39

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Taxonomy

Elizabethkingia miricola → Elizabethkingia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 648
ATGATTCAAGTAGAAAGTAATTCTGAAGTTGAACTATTAGAAAGAATAATTTCTGGTGATAAGGCACTATATGAAATAGTAGTTCGGAGATACAATCCATTCTTGTATAAGATTGGCCGCTCGTATAACTACGACCACGAAGACACGCAAGACCTTATGCAAGAAACTTTTATTGATGCTTACAAAAGCTTATCGAAATTTGAAAATCGCGCAAGTTTTAAAACGTGGATATTCAGAATTATGTTGAATAACTGCCATCGAAAAAGTCAAAAATTAAGTTTTAAAAATGAACTTTCAAAAGAAATAAAAGAAGATTCAAAGCCCATGTTTTCAAACTCAAAAAATAGTGCAGATGCTATGGTTCACAAACGCGAAGTAGCACATGTGATAGAGGCAGCCCTATCAAAAATTCCGGAAGAATACAGAATGGTTTTCTCGCTTAGGGAAATAAACGAGTTGAGCACTGCTGAAACTGCTGAGCTTTTAAATATTACAGAAACAAATGTGAAGGTTCGTTTAAATAGAGCCAAAACAATGCTTAGAAACGAAATTGAAAAGAATTACACCGCTAAAGAGCTTTACGAATTCAACTTAATTTATTGCAATGCAATAGTGAGTAATGTGATGCAAAAGATAAATGAACTTTAA
PROTEIN sequence
Length: 216
MIQVESNSEVELLERIISGDKALYEIVVRRYNPFLYKIGRSYNYDHEDTQDLMQETFIDAYKSLSKFENRASFKTWIFRIMLNNCHRKSQKLSFKNELSKEIKEDSKPMFSNSKNSADAMVHKREVAHVIEAALSKIPEEYRMVFSLREINELSTAETAELLNITETNVKVRLNRAKTMLRNEIEKNYTAKELYEFNLIYCNAIVSNVMQKINEL*