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scnpilot_p_inoc_scaffold_454_curated

Search features with annotation key words

Displaying items 61-90 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_454_curated_61
Brassica napus, Brassica, Brassicales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(67909..68871)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Capsella rubella RepID=R0I485_9BRAS
BnaC02g00830D protein {ECO:0000313|EMBL:CDY44804.1}; TaxID=3708 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.;" source="Brassica napus (Rape).;"
hydroxyproline-rich glycoprotein family protein
scnpilot_p_inoc_scaffold_454_curated_62
unknown

Not on your lists

comp(68903..69556)
DNA (654bp) protein (218aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_454_curated_63
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(69592..70941)
DNA (1350bp) protein (450aa)
OmpA/MotB domain protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RYU8_LEAB4
ompa/motb domain protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ADQ17345.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_p_inoc_scaffold_454_curated_64
Formosa agariphila, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

71527..72114
DNA (588bp) protein (196aa)
Cyclic nucleotide-binding protein n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KMZ1_9FLAO
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:CDF80272.1}; TaxID=1347342 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa agariphila KMM 3901.;"
Crp/Fnr family transcriptional regulator
scnpilot_p_inoc_scaffold_454_curated_65
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

72115..72414
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7LGV1_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM98945.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
hypothetical protein
scnpilot_p_inoc_scaffold_454_curated_66
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

72592..73413
DNA (822bp) protein (274aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WVY5_9PORP
HTH-type transcriptional activator RhaR {ECO:0000313|EMBL:AJW62405.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_454_curated_67
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

73477..73962
DNA (486bp) protein (162aa)
Glyoxalase-like domain protein n=1 Tax=Leptospira vanthielii serovar Holland str. Waz Holland = ATCC 700522 RepID=N1WAB6_9LEPT
Glyoxalase-like domain protein {ECO:0000313|EMBL:AJW62404.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
putative lipoprotein; K06996
scnpilot_p_inoc_scaffold_454_curated_68
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

74121..74447
DNA (327bp) protein (109aa)
Putative transcriptional regulator n=1 Tax=Flavobacterium sp. CF136 RepID=J3BVX6_9FLAO
Putative transcriptional regulator {ECO:0000313|EMBL:EJL59231.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
ArsR family transcriptional regulator
scnpilot_p_inoc_scaffold_454_curated_69
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

74497..74970
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FRT6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:BAP30878.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
hypothetical protein
scnpilot_p_inoc_scaffold_454_curated_70
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

75111..75527
DNA (417bp) protein (139aa)
protein tyrosine phosphatase (EC:1.20.4.1); K03741 arsenate reductase [EC:1.20.4.1]
Protein tyrosine phosphatase {ECO:0000313|EMBL:ADY51162.1}; EC=1.20.4.1 {ECO:0000313|EMBL:ADY51162.1};; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
Protein tyrosine phosphatase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S7D7_PEDSD
scnpilot_p_inoc_scaffold_454_curated_71
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

75789..76883
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis CL03T12C37 RepID=I9U9T1_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY79121.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
scnpilot_p_inoc_scaffold_454_curated_72
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

77131..78183
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XV78_FLAIG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG53048.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
scnpilot_p_inoc_scaffold_454_curated_73
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

78372..79295
DNA (924bp) protein (308aa)
Alpha/beta hydrolase {ECO:0000313|EMBL:KGD69374.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
Putative hydrolase or acyltransferase of alpha/beta superfamily id=1926553 bin=GWA2_Bacteroidetes_40_14 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good
alpha/beta hydrolase
scnpilot_p_inoc_scaffold_454_curated_74
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

79310..79861
DNA (552bp) protein (184aa)
Bifunctional deaminase-reductase domain protein id=4401826 bin=GWF2_Bacteroidetes_40_13 species=Muricauda ruestringensis genus=Muricauda taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
bifunctional deaminase-reductase domain-containing protein
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_p_inoc_scaffold_454_curated_75
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

80224..80571
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WW99_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06194.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_p_inoc_scaffold_454_curated_76
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

80641..81852
DNA (1212bp) protein (404aa)
RNA polymerase sigma factor n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GDS0_9BACT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
putative ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_p_inoc_scaffold_454_curated_77

Not on your lists

81864..82535
DNA (672bp) protein (224aa)
TIGR02453 family protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R4S9_OWEHD
Uncharacterized protein {ECO:0000313|EMBL:KKN20766.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_454_curated_78
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

82657..83016
DNA (360bp) protein (120aa)
Regulatory protein ArsR n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C8S2_SPHS2
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:ADZ81114.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_p_inoc_scaffold_454_curated_79
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

83063..83485
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NP98_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF15063.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_p_inoc_scaffold_454_curated_80
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

83590..84027
DNA (438bp) protein (146aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S962_PEDSD
Contig_75, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ14605.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
Activator of Hsp90 ATPase 1 family protein
scnpilot_p_inoc_scaffold_454_curated_81
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

84014..84391
DNA (378bp) protein (126aa)
Lactoylglutathione lyase-related protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11TS7_CYTH3
lactoylglutathione lyase-like protein
Lactoylglutathione lyase-related protein {ECO:0000313|EMBL:ABG59187.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
scnpilot_p_inoc_scaffold_454_curated_82
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

84398..84853
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00037ADD80
activator of Hsp90 ATPase 1 family protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
scnpilot_p_inoc_scaffold_454_curated_83
unknown

Not on your lists

84843..85007
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_454_curated_84
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

85018..85425
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI00036F4F34
glyoxalase/bleomycin resistance protein/dioxygenase; K07032
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_454_curated_85
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

85602..86063
DNA (462bp) protein (154aa)
Methyltransferase type 12 n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JUQ0_9BACT
Methyltransferase type 12 {ECO:0000313|EMBL:GAL83644.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
methyltransferase type 12
scnpilot_p_inoc_scaffold_454_curated_86
unknown

Not on your lists

comp(86170..88371)
DNA (2202bp) protein (734aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_454_curated_87
unknown

Not on your lists

comp(88432..88857)
DNA (426bp) protein (142aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_454_curated_88
unknown

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comp(88877..89305)
DNA (429bp) protein (143aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_454_curated_89
unknown

Not on your lists

comp(89325..89759)
DNA (435bp) protein (145aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_454_curated_90
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

90029..90487
DNA (459bp) protein (153aa)
Response regulator receiver protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RTD4_LEAB4
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADQ15948.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
Displaying items 61-90 of 91 in total

View Taxonomy