ggKbase home page

scnpilot_p_inoc_scaffold_454_curated_61

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(67909..68871)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Capsella rubella RepID=R0I485_9BRAS similarity UNIREF
DB: UNIREF100
  • Identity: 36.2
  • Coverage: 80.0
  • Bit_score: 62
  • Evalue 8.70e-07
BnaC02g00830D protein {ECO:0000313|EMBL:CDY44804.1}; TaxID=3708 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.;" source="Brassica napus (Rape).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.3
  • Coverage: 83.0
  • Bit_score: 68
  • Evalue 2.20e-08
hydroxyproline-rich glycoprotein family protein similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 86.0
  • Bit_score: 61
  • Evalue 6.10e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Brassica napus → Brassica → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 963
ATGATTGTAATGCTGATTTCGGTATCTGCATTTGCTGAAAAAGTCATTATTGCCAACTGCTCCGAGGGCGGCGGCTGCACATTTGAACTTTCGGATTTTGAAAGCGATTTGTTTAATAATGATTTTGGCAGGGACATACAGCCCGGTGACATCATCGTATTGGGCAAAAAGAATAACGGTGAGGTCATTACCTACTTGGACAAAAAATCCAGAGAAGATATTGACAGGGAATGGGGAGGCGACGGCTATACACAGATTGGGCTTTTCAATCCTTATCTGCAACCCATAGACGGCGTCTGGAGTGCTTCATACGGAACTTCATCAGGGAGCGATTGCTATGGTATCGGTAATATCGGTTCCTTCATCAGGAAGAAAATTACACCGGGAACAACCGGAAACGGCACTATCAGCTTTCAATATCCCTTTAATCCTGCACAGCTTTTTCCCTCCAACGAAATGCGTTGGGTAAAGACAGGATATAATACCTACAAAGGCATACTTGATTTCAATAACAGTACATCTGCCGGAATGAAAATGTATTATACTGTTACCATTGTGAGCAGGAAAAAAATAGAAACCTTTTATACTATAGAAATAAAAGTGCCTACAAAAGAAATCTGCATAGGGAAAGTGCCTGTCACCTTTACACTGGTAAAAGAAAAAACATCAGAAGACCCTTTTGGAAAGGACGAACCTGCGGATGATGACTTATTACCGGTAAATCCTAAAGGCAATGATGATTTGCTCCCGGTAAATCCTAAAGGAGACGACCTGCTGCCCGTAGAACCCGGCAACAATACCAGGCCTAATGTTCCGAGATTGGAAGACAACCCTAAACCGGATGTTCCAAAATTAGAGGATAATCCCCAACCCAAAGTGCCGCGCCTGGAAGACAATCCCAAACCAAACGTACCGCGGTTGGAGGATAAGCCCAAACCTGAAGTGCCCCGAATAAACGACTAA
PROTEIN sequence
Length: 321
MIVMLISVSAFAEKVIIANCSEGGGCTFELSDFESDLFNNDFGRDIQPGDIIVLGKKNNGEVITYLDKKSREDIDREWGGDGYTQIGLFNPYLQPIDGVWSASYGTSSGSDCYGIGNIGSFIRKKITPGTTGNGTISFQYPFNPAQLFPSNEMRWVKTGYNTYKGILDFNNSTSAGMKMYYTVTIVSRKKIETFYTIEIKVPTKEICIGKVPVTFTLVKEKTSEDPFGKDEPADDDLLPVNPKGNDDLLPVNPKGDDLLPVEPGNNTRPNVPRLEDNPKPDVPKLEDNPQPKVPRLEDNPKPNVPRLEDKPKPEVPRIND*