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scnpilot_p_inoc_scaffold_302_curated

Search features with annotation key words

Displaying items 31-60 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_302_curated_31
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34786..35082)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZV4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:BAP31959.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
hypothetical protein
scnpilot_p_inoc_scaffold_302_curated_32
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35088..35441)
DNA (354bp) protein (118aa)
DNA-binding protein n=1 Tax=Empedobacter brevis RepID=UPI000366D70E
Uncharacterized protein {ECO:0000313|EMBL:BAP31960.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
hypothetical protein
scnpilot_p_inoc_scaffold_302_curated_33
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(35694..36539)
DNA (846bp) protein (282aa)
RteC protein n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z136_BELBD
RteC protein
RteC protein {ECO:0000313|EMBL:AFL82954.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
scnpilot_p_inoc_scaffold_302_curated_34
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36729..38066
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00037F7466
Two-component response regulator, sigma-54 related protein {ECO:0000313|EMBL:CDS92329.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
two component, sigma54 specific, transcriptional regulator, Fis family
scnpilot_p_inoc_scaffold_302_curated_35

Not on your lists

comp(38071..39015)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus MS1146 RepID=F4MSR7_STASA
Uncharacterized protein {ECO:0000313|EMBL:KKN68529.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sodium/bile acid symporter family protein
scnpilot_p_inoc_scaffold_302_curated_36
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(39038..39730)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003748CA8
K+ uptake transporter, KtrA subunit; K03499 trk system potassium uptake protein TrkA
K+ uptake transporter, KtrA subunit {ECO:0000313|EMBL:AEK24171.1}; TaxID=860228 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus (strain 5).;"
scnpilot_p_inoc_scaffold_302_curated_37
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(39745..41484)
DNA (1740bp) protein (580aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003639BEB
Ktr system potassium uptake protein B
Ktr system potassium uptake protein B {ECO:0000313|EMBL:AEK24170.1}; TaxID=860228 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus (strain 5).;"
scnpilot_p_inoc_scaffold_302_curated_38
Myroides odoratus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(41502..42809)
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00036CF829
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ44237.1}; TaxID=929704 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratus DSM 2801.;"
hypothetical protein
scnpilot_p_inoc_scaffold_302_curated_39
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42823..44154)
DNA (1332bp) protein (444aa)
sodium:proton antiporter n=1 Tax=Empedobacter brevis RepID=UPI00036DA0ED
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=883154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CIP 101113.;"
nhaA_2; Na+/H+ antiporter NhaA; K03313 Na+:H+ antiporter, NhaA family
scnpilot_p_inoc_scaffold_302_curated_40
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

44723..45082
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003655D0B
Uncharacterized protein {ECO:0000313|EMBL:AIM39085.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
scnpilot_p_inoc_scaffold_302_curated_41
unknown

Not on your lists

45089..45256
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_302_curated_42
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

45379..45762
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S639_PEDSD
Uncharacterized protein {ECO:0000313|EMBL:AIM39084.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
hypothetical protein
scnpilot_p_inoc_scaffold_302_curated_43
unknown

Not on your lists

45850..45963
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_302_curated_44
unknown

Not on your lists

45960..46073
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_302_curated_45
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

46109..47767
DNA (1659bp) protein (553aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacte
potassium-transporting ATPase subunit A (EC:3.6.3.12); K01546 K+-transporting ATPase ATPase A chain [EC:3.6.3.12]
potassium-transporting ATPase subunit A n=1 Tax=Empedobacter brevis RepID=UPI00036AEE3D
scnpilot_p_inoc_scaffold_302_curated_46
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

47821..49797
DNA (1977bp) protein (659aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacte
potassium-transporting ATPase subunit B (EC:3.6.3.12); K01547 K+-transporting ATPase ATPase B chain [EC:3.6.3.12]
potassium-transporting ATPase subunit B n=1 Tax=Empedobacter brevis RepID=UPI000377AB0A
scnpilot_p_inoc_scaffold_302_curated_47
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

49819..50379
DNA (561bp) protein (187aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276, ECO:0000313|EMBL:AIM39081.1};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobact
potassium-transporting ATPase subunit C (EC:3.6.3.12); K01548 K+-transporting ATPase ATPase C chain [EC:3.6.3.12]
potassium transporter KtrB n=1 Tax=Empedobacter brevis RepID=UPI00036A6EB9
scnpilot_p_inoc_scaffold_302_curated_48
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

50583..51650
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003743602
Outer membrane protein {ECO:0000313|EMBL:AIM39080.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
hypothetical protein
scnpilot_p_inoc_scaffold_302_curated_49
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

51730..52851
DNA (1122bp) protein (374aa)
osmosensitive K channel signal transduction histidine kinase, sensor subunit KdpD; K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
FrrC, osmosensitive K+ channel histidine kinase n=1 Tax=Empedobacter brevis RepID=UPI0003610D4F
Histidine kinase {ECO:0000313|EMBL:KFC18383.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
scnpilot_p_inoc_scaffold_302_curated_50
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

52853..54589
DNA (1737bp) protein (579aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00035D5FC7
two-component sensor histidine kinase
scnpilot_p_inoc_scaffold_302_curated_51
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

54654..55490
DNA (837bp) protein (279aa)
Tetracycline regulation of excision, RteC n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C771_SPHS2
tetracycline regulation of excision RteC
Tetracycline regulation of excision, RteC {ECO:0000313|EMBL:AIM35263.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
scnpilot_p_inoc_scaffold_302_curated_52
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

55685..56731
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GRK5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH56533.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Relaxase/mobilization nuclease family protein
scnpilot_p_inoc_scaffold_302_curated_53
unknown

Not on your lists

comp(56795..57976)
DNA (1182bp) protein (394aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_302_curated_54
unknown

Not on your lists

comp(57992..58516)
DNA (525bp) protein (175aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_302_curated_55
unknown

Not on your lists

comp(58569..58790)
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_302_curated_56
unknown

Not on your lists

comp(58830..59246)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Francisella novicida FTG RepID=E2MT81_FRANO
scnpilot_p_inoc_scaffold_302_curated_57
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(59272..59937)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00036D8EAA
Resolvase domain-containing protein {ECO:0000313|EMBL:EHQ29784.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
Resolvase domain-containing protein
scnpilot_p_inoc_scaffold_302_curated_58
unknown

Not on your lists

60210..60635
DNA (426bp) protein (142aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_302_curated_59
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

60699..62222
DNA (1524bp) protein (508aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I9GJ30_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KJS06734.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
hypothetical protein
scnpilot_p_inoc_scaffold_302_curated_60
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

62236..64299
DNA (2064bp) protein (688aa)
Uncharacterized protein n=1 Tax=Coprobacter fastidiosus NSB1 RepID=U5CJK0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KJS06733.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
Displaying items 31-60 of 103 in total

View Taxonomy