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scnpilot_p_inoc_scaffold_302_curated_34

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 36729..38066

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00037F7466 similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 445.0
  • Bit_score: 747
  • Evalue 1.10e-212
Two-component response regulator, sigma-54 related protein {ECO:0000313|EMBL:CDS92329.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 445.0
  • Bit_score: 646
  • Evalue 2.80e-182
two component, sigma54 specific, transcriptional regulator, Fis family similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 447.0
  • Bit_score: 616
  • Evalue 8.90e-174

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Taxonomy

Sphingobacterium sp. PM2-P1-29 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1338
GTGGTAAAAGTTTTAATAATAGACGATGAGGAAAAATTGAGAAATCTACTTTCAAAAATTATTGGTTTTGAAGGTTTTGAGGTTTTTCAGGCATCTAGCATAAAATCGGGATTGCAACGATTAGATGTAGAAGAAATAGATGTGGTGATATGCGATGTAAAACTCCCGGATGGAAGTGGTGTAGATACCGCAAAAGTTATCAAAGAAAAATATCCTGCTGTAGAGGTAATTCTTTTGACCGCTTTCGGAAATATTTCTGATGGTGTACAGGCAATAAAGAACGGGGCTTTCGACTATATTACGAAAGGTGATGACAACAATAAAATAATCCCGCTTCTATATAAAGCCAGTGAAAAGGTTGCTTTAAACAAGAGAGTTCAAAAATTAGAAAAACAATTAGGCGAAAAACATTCGTTCGATAAAATCATCGGTACATCTAAGCCTATCATCAAAGCTATTGAGCTAGCCCGAAAAGTGGCTGGCACAGACACGACTGTTTTATTGACAGGAGAAACAGGTACTGGTAAAGAAGTCTTTGCACAAGCCATCCATCAGGGAAGTCAACGGGTTAACCACAACTTTGTAGCTATCAATTGCTCAGCATTTAGTAAAGATCTGTTGGAAAACGAATTGTTCGGGCACAAAGCAGGGGCTTTTACAGGAGCCTCAAAAGACCAGAAAGGGCTTTTTGAGGAAGCGCATAACGGCACTATTTTTCTGGATGAAATCGGGGAAATGGCACTGGATCTCCAAGCTAAGATTTTGCGGGTACTGGAATCAGGCGAATTGCTTCGTGTGGGGGATGCAAAGCCCATTAAGGTCAATGTACGTATCATTGCTGCGACAAATCGTAATCTGGAAGAGGAAATAGAGAAAGAACATTTTAGAAGCGATCTCTTTTACCGTCTTTCTGTCTTTGGCATTCACCTGCCTTCATTAAGGGAACGTCCCAAAGACATCAAATTATTAGCAGAATATTATGCCAGTATATTCGCACTAAAATCAAACAGAAAACCTTTGAGGTTAACGGATGAATACATGGAGGCTCTGGAGAACAATGCATGGAAAGGTAACATCCGTGAATTAAAAAACGTGATTGAAAGAAGTGTAATTCTGGCAGATGCTGACGTGCTAGATCTGGATACATTACCCGCTGACCTACAATATGCCAAATCCAATGCGCAACAGTTGTCCGCATTTTCTATGGCAAGTGCTGAAAAACTGCACATACAGAAAATTCTTAATCATACGGGAGGTAATAAAGCGGAAGCAGCCCGATTACTGGAAATTGGGGTAGCAACACTTTACAGAAAAATGGAGCAATACAAAATTCAGTAG
PROTEIN sequence
Length: 446
VVKVLIIDDEEKLRNLLSKIIGFEGFEVFQASSIKSGLQRLDVEEIDVVICDVKLPDGSGVDTAKVIKEKYPAVEVILLTAFGNISDGVQAIKNGAFDYITKGDDNNKIIPLLYKASEKVALNKRVQKLEKQLGEKHSFDKIIGTSKPIIKAIELARKVAGTDTTVLLTGETGTGKEVFAQAIHQGSQRVNHNFVAINCSAFSKDLLENELFGHKAGAFTGASKDQKGLFEEAHNGTIFLDEIGEMALDLQAKILRVLESGELLRVGDAKPIKVNVRIIAATNRNLEEEIEKEHFRSDLFYRLSVFGIHLPSLRERPKDIKLLAEYYASIFALKSNRKPLRLTDEYMEALENNAWKGNIRELKNVIERSVILADADVLDLDTLPADLQYAKSNAQQLSAFSMASAEKLHIQKILNHTGGNKAEAARLLEIGVATLYRKMEQYKIQ*