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scnpilot_p_inoc_scaffold_33_curated

Search features with annotation key words

Displaying items 1-30 of 315 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_33_curated_1
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..1507)
DNA (1506bp) protein (502aa)
Putative uncharacterized protein id=3899708 bin=GWF2_Bacteroidetes_38_335 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
Tax=GWF2_Bacteroidetes_38_335_curated
scnpilot_p_inoc_scaffold_33_curated_2
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1543..3825)
DNA (2283bp) protein (761aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS04312.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
PDK repeat-containing protein id=2594699 bin=GWF2_Bacteroidetes_38_335 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
mannosidase-related
scnpilot_p_inoc_scaffold_33_curated_3
unknown

Not on your lists

3887..4123
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_33_curated_4
unknown

Not on your lists

comp(4184..5170)
DNA (987bp) protein (329aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_33_curated_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5322..5999)
DNA (678bp) protein (226aa)
SNARE associated Golgi protein-related protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C1N2_SPHS2
Alkaline phosphatase {ECO:0000313|EMBL:KIC96251.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein; K03975 membrane-associated protein
scnpilot_p_inoc_scaffold_33_curated_6
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6072..6413)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037DA172
Uncharacterized protein {ECO:0000313|EMBL:KIC89692.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_p_inoc_scaffold_33_curated_7
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6461..7570
DNA (1110bp) protein (370aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HS24_9SPHI
NGG1p interacting factor 3 protein, NIF3
scnpilot_p_inoc_scaffold_33_curated_8
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7677..8435
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ58_CHIPD
hypothetical protein; K07164
Uncharacterized protein {ECO:0000313|EMBL:ACU64296.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_33_curated_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8722..10344)
DNA (1623bp) protein (541aa)
pyrG; CTP synthetase; K01937 CTP synthase [EC:6.3.4.2]
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
CTP synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMB1_CHIPD
scnpilot_p_inoc_scaffold_33_curated_10
unknown

Not on your lists

comp(10820..12100)
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368CEAD
scnpilot_p_inoc_scaffold_33_curated_11
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12200..13042)
DNA (843bp) protein (281aa)
Acetyltransferase, GNAT family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZ01_9FLAO
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFK36302.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
N-acetyltransferase GCN5
scnpilot_p_inoc_scaffold_33_curated_12
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13400..15037
DNA (1638bp) protein (546aa)
Ferredoxin-dependent glutamate synthase n=2 Tax=Myroides RepID=H1ZF06_MYROD
Uncharacterized protein {ECO:0000313|EMBL:EKB05762.1}; TaxID=883155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides [odoratimimus] CIP 103059.;"
glutamate synthase family protein
scnpilot_p_inoc_scaffold_33_curated_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15547..16836)
DNA (1290bp) protein (430aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F3698
X-Pro aminopeptidase {ECO:0000313|EMBL:KIC90441.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_p_inoc_scaffold_33_curated_14
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17118..19904
DNA (2787bp) protein (929aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000363F0AB
Cell division protein FtsK {ECO:0000313|EMBL:KEQ30626.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
scnpilot_p_inoc_scaffold_33_curated_15
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20778..21962)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C386_9FLAO
von Willebrand factor type A {ECO:0000313|EMBL:KIA98307.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
scnpilot_p_inoc_scaffold_33_curated_16
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22132..23973
DNA (1842bp) protein (614aa)
Putative regulator of cell autolysis n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S659_9FLAO
Putative regulator of cell autolysis {ECO:0000313|EMBL:ESU19880.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
autolysin sensor kinase
scnpilot_p_inoc_scaffold_33_curated_17
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23954..24700
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IV54_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK03104.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
LytTR family two component transcriptional regulator; K02477 two-component system, LytT family, response regulator
scnpilot_p_inoc_scaffold_33_curated_18
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24929..26212)
DNA (1284bp) protein (428aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
enolase; K01689 enolase [EC:4.2.1.11]
Enolase n=1 Tax=Niabella soli DSM 19437 RepID=H1NTC9_9SPHI
scnpilot_p_inoc_scaffold_33_curated_19
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26339..26752)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B72B4B
Uncharacterized protein {ECO:0000313|EMBL:AHJ97078.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
hypothetical protein
scnpilot_p_inoc_scaffold_33_curated_20
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26758..27270)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003777F5E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94838.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_33_curated_21
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27625..32781
DNA (5157bp) protein (1719aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3BXT1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL60281.1}; Flags: Precursor;; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
hypothetical protein
scnpilot_p_inoc_scaffold_33_curated_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32798..34222)
DNA (1425bp) protein (475aa)
Surface antigen variable number repeat-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THG8_NIAKG
surface antigen variable number repeat-containing protein
Surface antigen variable number repeat-containing protein {ECO:0000313|EMBL:AEW02814.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_33_curated_23
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34222..35091)
DNA (870bp) protein (290aa)
Isopropylmalate/homocitrate/citramalate synthase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUH6_SOLCM
isopropylmalate/homocitrate/citramalate synthase
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:AFD07341.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_p_inoc_scaffold_33_curated_24
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35201..36481
DNA (1281bp) protein (427aa)
glycine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Serine hydroxymethyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PV99_CHIPD
scnpilot_p_inoc_scaffold_33_curated_25
unknown

Not on your lists

36486..36596
DNA (111bp) protein (37aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_33_curated_26
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

36575..37888
DNA (1314bp) protein (438aa)
deoxyribodipyrimidine photo-lyase (EC:4.1.99.3); K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Deoxyribodipyrimidine photo-lyase n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0NU93_ELIME
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:KFC18809.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
scnpilot_p_inoc_scaffold_33_curated_27
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37968..39569)
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 332 str. F0381 RepID=L1NSB7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF16869.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_33_curated_28
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

40198..40965
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FUS8_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA07767.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_33_curated_29
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

41064..41702
DNA (639bp) protein (213aa)
cyclophilin type peptidyl-prolyl cis-trans isomerase; K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VJS9_9SPHI
Peptidyl-prolyl cis-trans isomerase cyclophilin type {ECO:0000313|EMBL:KGE13349.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
scnpilot_p_inoc_scaffold_33_curated_30
unknown

Not on your lists

42424..43188
DNA (765bp) protein (255aa)

This feature has no annotations

Displaying items 1-30 of 315 in total

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