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scnpilot_p_inoc_scaffold_802_curated_4

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 5090..5785

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PP43_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 231.0
  • Bit_score: 283
  • Evalue 1.70e-73
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 231.0
  • Bit_score: 283
  • Evalue 5.50e-74
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACU58740.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 231.0
  • Bit_score: 283
  • Evalue 2.40e-73

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 696
ATGCAACAACAATTTAAAGCCAAGATCTTATTAGTGGAAGATGACTCTGCTTTGGGATTTGTTATTAAGGATAATTTGGAGGAAGCAGGATATGAAGTGATATATACGACAGACGGTAACCAGGGCTTTCAGCAGTTCATGCGCCACAACGTGGACCTGTGCCTGCTGGACGTGATGATGCCCAAGAAGGACGGCCTGACGCTGGCAGCGCAGATCCGTCAGAAAAATAATAAGGTGCCCGTAATCTTTATGACGGCAAAATCCATGGACGAGGACAGGATCGCCGGCTTTAAGGCGGGCGGTGATGATTATATCACCAAGCCGTTCAATATGGAGGAGCTGCTGCTGAGGATAGAAGTGTTCCTCAAGCACACCAAGAAAAACGATGAAGATGAAAAGAAAGTATTCAATATCGGTAACCTGGTGTTCGATTATGCCAACCTTACGCTGATAGAAGGCGAAAAGAAGAACCAGCTCACCCAGAAGGAAGCAGACCTGCTCCGCTACCTGTGCGTGAATGCCAATACGGTGGTCAAGAGGGAAGAGATCCTGATGGATGTATGGGGTAAGGAAGACCCGTTCCTGGGACGAAGCATGGATGTGTTCATGACCAAGCTGCGTAAATATCTTAAGGATGTGGAAGGCGTGGAGCTCCAGACCATTCACAGGGTCGGATTCAAGCTGATCTTACCATAA
PROTEIN sequence
Length: 232
MQQQFKAKILLVEDDSALGFVIKDNLEEAGYEVIYTTDGNQGFQQFMRHNVDLCLLDVMMPKKDGLTLAAQIRQKNNKVPVIFMTAKSMDEDRIAGFKAGGDDYITKPFNMEELLLRIEVFLKHTKKNDEDEKKVFNIGNLVFDYANLTLIEGEKKNQLTQKEADLLRYLCVNANTVVKREEILMDVWGKEDPFLGRSMDVFMTKLRKYLKDVEGVELQTIHRVGFKLILP*