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scnpilot_p_inoc_scaffold_802_curated

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_802_curated_1
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

276..2627
DNA (2352bp) protein (784aa)
TonB-dependent receptor plug n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GQE1_9BACT
TonB-dependent receptor plug {ECO:0000313|EMBL:CCH56119.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
TonB-dependent receptor plug
scnpilot_p_inoc_scaffold_802_curated_2
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2643..3479
DNA (837bp) protein (279aa)
Uncharacterized protein {ECO:0000313|EMBL:GAL85002.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
scnpilot_p_inoc_scaffold_802_curated_3
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

3765..5057
DNA (1293bp) protein (431aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
integral membrane sensor signal transduction histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
Sensor protein RprX n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JQR7_9BACT
scnpilot_p_inoc_scaffold_802_curated_4
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5090..5785
DNA (696bp) protein (232aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PP43_CHIPD
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACU58740.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_802_curated_5
Idiomarina baltica, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5826..6335
DNA (510bp) protein (170aa)
Outer membrane protein and related peptidoglycan-associated(Lipo)proteins n=1 Tax=Idiomarina baltica OS145 RepID=A3WK59_9GAMM
Outer membrane protein and related peptidoglycan-associated(Lipo)proteins {ECO:0000313|EMBL:EAQ32769.1}; TaxID=314276 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina baltica OS145.;"
OmpA family protein
scnpilot_p_inoc_scaffold_802_curated_6
unknown

Not on your lists

comp(6415..7119)
DNA (705bp) protein (235aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_802_curated_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7126..7512)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NK49_9SPHI
Membrane protein {ECO:0000313|EMBL:AHF14025.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_p_inoc_scaffold_802_curated_8
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7505..8038)
DNA (534bp) protein (178aa)
shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71]
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
Shikimate kinase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C7T3_SPHS2
scnpilot_p_inoc_scaffold_802_curated_9
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(8035..8835)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003782CF7
alpha/beta hydrolase
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:AFL85658.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
scnpilot_p_inoc_scaffold_802_curated_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8928..9422
DNA (495bp) protein (165aa)
phosphoribosyltransferase; K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
Phosphoribosyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PE94_CHIPD
Phosphoribosyltransferase {ECO:0000313|EMBL:ACU63303.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_802_curated_11
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9555..9827
DNA (273bp) protein (91aa)
Putative membrane protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CL91_9FLAO
Putative membrane protein {ECO:0000313|EMBL:EJL73869.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
transglycosylase
scnpilot_p_inoc_scaffold_802_curated_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10249..11127)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PS38_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:KIC93750.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_p_inoc_scaffold_802_curated_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(11277..12023)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKA7_NIAKG
hypothetical protein; K02066 putative ABC transport system permease protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_p_inoc_scaffold_802_curated_14
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12174..14066
DNA (1893bp) protein (631aa)
PKD domain containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIF1_FLUTR
Uncharacterized protein {ECO:0000313|EMBL:KJS06916.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
PKD domain-containing protein
scnpilot_p_inoc_scaffold_802_curated_15
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14157..15770)
DNA (1614bp) protein (538aa)
Putative cysteine ligase BshC {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275526}; EC=6.-.-.- {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275528};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
UPF0747 protein Cpin_4721 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLU4_CHIPD
hypothetical protein
scnpilot_p_inoc_scaffold_802_curated_16
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15891..18053
DNA (2163bp) protein (721aa)
dipeptidyl-peptidase IV; K01278 dipeptidyl-peptidase 4 [EC:3.4.14.5]
Dipeptidyl-peptidase IV {ECO:0000313|EMBL:AEE51300.1}; EC=3.4.14.5 {ECO:0000313|EMBL:AEE51300.1};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
Dipeptidyl-peptidase IV n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KVI7_HALH1
scnpilot_p_inoc_scaffold_802_curated_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18068..19861
DNA (1794bp) protein (598aa)
Surface antigen (D15) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMQ1_NIAKG
surface antigen (D15)
Surface antigen (D15) {ECO:0000313|EMBL:AEW03072.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_802_curated_18
unknown

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19988..20710
DNA (723bp) protein (241aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_802_curated_19
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20720..22495)
DNA (1776bp) protein (592aa)
exodeoxyribonuclease V subunit alpha; K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Exodeoxyribonuclease V, alpha subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDT2_CHIPD
scnpilot_p_inoc_scaffold_802_curated_20
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22557..23330)
DNA (774bp) protein (258aa)
rfbF; putative glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33); K00978 glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
Probable glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:CCB68859.1}; EC=2.7.7.33 {ECO:0000313|EMBL:CCB68859.1};; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
Probable glucose-1-phosphate cytidylyltransferase n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z6L7_FLABF
scnpilot_p_inoc_scaffold_802_curated_21
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23443..24441)
DNA (999bp) protein (333aa)
Adenine-specific DNA methylase n=1 Tax=Riemerella anatipestifer RA-CH-1 RepID=J9R5P8_RIEAN
Adenine-specific DNA methylase
Adenine-specific DNA methylase {ECO:0000313|EMBL:AFR35778.1}; TaxID=1228997 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer RA-CH-1.;"
scnpilot_p_inoc_scaffold_802_curated_22
Nitratifractor salsuginis, Nitratifractor, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24450..25067)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6WZB6_NITSE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV46628.1}; TaxID=749222 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Nitratifractor.;" source="Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1).;"
scnpilot_p_inoc_scaffold_802_curated_23
Shewanella sp. ANA-3, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25220..25663
DNA (444bp) protein (148aa)
Lipoprotein n=1 Tax=Shewanella sp. (strain ANA-3) RepID=A0KV04_SHESA
lipoprotein
Lipoprotein {ECO:0000313|EMBL:ABK47623.1}; TaxID=94122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. (strain ANA-3).;"
scnpilot_p_inoc_scaffold_802_curated_24
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25832..26377)
DNA (546bp) protein (182aa)
Lipocalin-like protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8B9_9FLAO
Lipocalin-like protein {ECO:0000313|EMBL:EFK35815.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
outer membrane lipoprotein (lipocalin); K03098 outer membrane lipoprotein Blc
scnpilot_p_inoc_scaffold_802_curated_25
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(27200..28786)
DNA (1587bp) protein (529aa)
Putative uncharacterized protein id=4852762 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_p_inoc_scaffold_802_curated_26
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28926..30179)
DNA (1254bp) protein (418aa)
Glucose sorbosone dehydrogenase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GLE5_9BACT
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:CCH54721.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
glucose sorbosone dehydrogenase
scnpilot_p_inoc_scaffold_802_curated_27
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30270..32519)
DNA (2250bp) protein (750aa)
Coagulation factor 5/8 type domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) PF15_CHIPD">RepID=C7PF15_CHIPD
coagulation factor 5/8 type domain-containing protein
Coagulation factor 5/8 type domain protein {ECO:0000313|EMBL:ACU59742.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_802_curated_28
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32532..35399)
DNA (2868bp) protein (956aa)
TPR repeat-containing protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) PF16_CHIPD">RepID=C7PF16_CHIPD
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ACU59743.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_802_curated_29
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35434..36933)
DNA (1500bp) protein (500aa)
Glycosyl transferase family 2 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) PF17_CHIPD">RepID=C7PF17_CHIPD
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACU59744.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_802_curated_30
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36948..38387)
DNA (1440bp) protein (480aa)
Glycosyl transferase family 2 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) PF18_CHIPD">RepID=C7PF18_CHIPD
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACU59745.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Displaying items 1-30 of 33 in total

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