ggKbase home page

scnpilot_p_inoc_scaffold_72_curated_77

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(93055..93660)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 189.0
  • Bit_score: 266
  • Evalue 3.50e-68
RNAse hii (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 190.0
  • Bit_score: 255
  • Evalue 1.10e-65
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002FF49E6 similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 190.0
  • Bit_score: 259
  • Evalue 4.00e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter glucosidilyticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 606
TTGAAACCTAAAGACGCCATAAGCTGTTCCCTGCTGCCGTATTACCAGAAAGAGCTGGTGGAAGCAGGATGTGATGAAGCCGGCAGAGGATGCATCGCGGGACCGGTAGTGGCAGCCGCAGTGATCCTTCCGGCAGATTTCTATCACCCCTTGCTGAATGACAGCAAACAGATCACGGAAGTGCAGCGGGACCTCCTGCGGCCGGTCATAGAACGGGAGGCCCTGGCCTGGGCGGTAGCTGCGGTGGATCATAAGGAGATAGATAAGATCAATATCCTGCAGGCTTCCTTTAAGGCTATGCACCTGGCGATAGACCAGCTGCACCTGCGCCCCGGCTTATTGCTGATAGACGGTAACCGCTTTAAGCCCTACTGGCAGATACCGCACCAGTGCATTGTCAAGGGTGATAGTAAGTATGCAGCGATAGCAGCGGCAAGCATTCTGGCCAAAACGCACCGGGACGCCCTCATGAAGCAACTGGACAGGGAATTTCCCGATTACGACTGGAAGACCAATAAGGGCTACCCGACACCCCGGCATAAAAAAGTGGTCAGGGAAAAAGGCTATGCGGCTTATCACCGGCTGAGCTATAAGATAAAATTATAG
PROTEIN sequence
Length: 202
LKPKDAISCSLLPYYQKELVEAGCDEAGRGCIAGPVVAAAVILPADFYHPLLNDSKQITEVQRDLLRPVIEREALAWAVAAVDHKEIDKINILQASFKAMHLAIDQLHLRPGLLLIDGNRFKPYWQIPHQCIVKGDSKYAAIAAASILAKTHRDALMKQLDREFPDYDWKTNKGYPTPRHKKVVREKGYAAYHRLSYKIKL*