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scnpilot_p_inoc_scaffold_72_curated

Search features with annotation key words

Displaying items 1-30 of 231 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_72_curated_1
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2..2869)
DNA (2868bp) protein (956aa)
Putative type IIS restriction/modification enzyme n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S7D0_PEDSD
Putative type IIS restriction/modification enzyme {ECO:0000313|EMBL:ADY51155.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
type IIS restriction/modification enzyme
scnpilot_p_inoc_scaffold_72_curated_2
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(3207..4553)
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037B2D08
type III restriction protein res subunit
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_p_inoc_scaffold_72_curated_3
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4616..6172)
DNA (1557bp) protein (519aa)
Phage protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UY72_9BACT
Phage protein {ECO:0000313|EMBL:CCZ76051.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
phage protein
scnpilot_p_inoc_scaffold_72_curated_4
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6465..7448)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z635_BELBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL84703.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
scnpilot_p_inoc_scaffold_72_curated_5
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7516..8256)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z636_BELBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL84704.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
scnpilot_p_inoc_scaffold_72_curated_6
Capnocytophaga granulosa, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8663..9202)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Capnocytophaga granulosa ATCC 51502 RepID=S2WH87_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EPD27219.1}; TaxID=641143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga granulosa ATCC 51502.;"
PIN domain superfamily protein
scnpilot_p_inoc_scaffold_72_curated_7
Capnocytophaga sp. oral taxon 863, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9189..9542)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 863 str. F0517 RepID=U2AX95_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ERI64715.1}; TaxID=1227266 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 863 str. F0517.;"
hypothetical protein
scnpilot_p_inoc_scaffold_72_curated_8
Capnocytophaga sp. oral taxon 863, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9584..10474)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 863 str. F0517 RepID=U2CBI2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ERI64716.1}; TaxID=1227266 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 863 str. F0517.;"
hypothetical protein
scnpilot_p_inoc_scaffold_72_curated_9
unknown

Not on your lists

comp(10615..10956)
DNA (342bp) protein (114aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_72_curated_10
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11401..14421
DNA (3021bp) protein (1007aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R348_OWEHD
Uncharacterized protein {ECO:0000313|EMBL:CDT29333.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
scnpilot_p_inoc_scaffold_72_curated_11
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

14490..16901
DNA (2412bp) protein (804aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003674903
secreted protein containing PKD domain
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
scnpilot_p_inoc_scaffold_72_curated_12
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(16976..18583)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A3T4_MELRP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFN75873.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
scnpilot_p_inoc_scaffold_72_curated_13
unknown

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comp(19537..19773)
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_72_curated_14
unknown

Not on your lists

20482..20796
DNA (315bp) protein (105aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_72_curated_15
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20793..22520
DNA (1728bp) protein (576aa)
Resolvase domain-containing protein id=4247566 bin=GWF2_Bacteroidetes_33_38 species=Flavobacteriaceae bacterium HQM9 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
resolvase domain-containing protein
Tax=GWF2_Bacteroidetes_33_38_curated
scnpilot_p_inoc_scaffold_72_curated_16
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22511..23707
DNA (1197bp) protein (399aa)
Glycosyl transferase family 2 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAZ6_CHIPD
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACU59368.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_72_curated_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23733..24647
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI62_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00679.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_72_curated_18
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24765..25538)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Microcystis aeruginosa PCC 9808 RepID=I4HXU8_MICAE
Uncharacterized protein {ECO:0000313|EMBL:CCI26872.1}; TaxID=1160284 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9808.;"
scnpilot_p_inoc_scaffold_72_curated_19
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25661..29413
DNA (3753bp) protein (1251aa)
SNF2-related protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PHB5_CHIPD
SNF2-like protein
SNF2-related protein {ECO:0000313|EMBL:ACU58094.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_72_curated_20
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29496..29957
DNA (462bp) protein (154aa)
TonB-dependent receptor n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PUN1_9BACE
TonB-dependent receptor {ECO:0000313|EMBL:EGF56102.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
outer membrane protein TonB
scnpilot_p_inoc_scaffold_72_curated_21
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30019..31392)
DNA (1374bp) protein (458aa)
succinate-semialdehyde dehydrogenase (NAD(P)(+)) (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Succinate-semialdehyde dehydrogenase (NAD(P)(+)) n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK33_RHOMR
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ACY48889.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
scnpilot_p_inoc_scaffold_72_curated_22
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31513..32376
DNA (864bp) protein (288aa)
Competence protein ComEA helix-hairpin-helix repeat region n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FUU1_9SPHI
Competence protein ComEA helix-hairpin-helix repeat region {ECO:0000313|EMBL:EEI93295.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
DNA uptake protein and related DNA-binding protein
scnpilot_p_inoc_scaffold_72_curated_23
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32404..33543
DNA (1140bp) protein (380aa)
Butyryl-CoA dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP72_NIAKG
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KIC92465.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
butyryl-CoA dehydrogenase
scnpilot_p_inoc_scaffold_72_curated_24
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34615..35376)
DNA (762bp) protein (254aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5C6G9_9BACT
scnpilot_p_inoc_scaffold_72_curated_25
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35401..36585)
DNA (1185bp) protein (395aa)
glucose-1-phosphate thymidylyltransferase n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI0003609EAF
sugar-1-phosphate guanyl transferase
Sugar-1-phosphate guanyl transferase {ECO:0000313|EMBL:ADF52359.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
scnpilot_p_inoc_scaffold_72_curated_26
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36598..37314)
DNA (717bp) protein (239aa)
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035C1355
Pseudouridine synthase {ECO:0000313|EMBL:ACU58700.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_72_curated_27
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37311..37751)
DNA (441bp) protein (147aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Endoribonuclease YbeY n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIQ5_CHIPD
hypothetical protein
scnpilot_p_inoc_scaffold_72_curated_28
unknown

Not on your lists

comp(37756..38004)
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_72_curated_29
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38079..38567)
DNA (489bp) protein (163aa)
GAF domain-containing protein n=3 Tax=Acinetobacter gyllenbergii RepID=S3NSN6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAO42939.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
gafA; GAF domain-containing protein
scnpilot_p_inoc_scaffold_72_curated_30
unknown

Not on your lists

comp(38657..39499)
DNA (843bp) protein (281aa)

This feature has no annotations

Displaying items 1-30 of 231 in total

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