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scnpilot_p_inoc_scaffold_72_curated

Search features with annotation key words

Displaying items 121-150 of 231 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_72_curated_121
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

144347..145858
DNA (1512bp) protein (504aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase; K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
Phosphoribosylaminoimidazolecarboxamideformyltra nsferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NQB1_9SPHI
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_p_inoc_scaffold_72_curated_122
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

146320..146727
DNA (408bp) protein (136aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00022577}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00022596};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
rnpA; ribonuclease P; K03536 ribonuclease P protein component [EC:3.1.26.5]
Ribonuclease P protein component id=4402565 bin=GWA2_Flavobacterium_35_26 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
scnpilot_p_inoc_scaffold_72_curated_123
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

146891..147100
DNA (210bp) protein (70aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FZ00_9SPHI
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein; K08998 hypothetical protein
scnpilot_p_inoc_scaffold_72_curated_124
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(147112..147711)
DNA (600bp) protein (200aa)
Transferase hexapeptide repeat containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TA53_NIAKG
transferase hexapeptide repeat containing protein; K08279 carnitine operon protein CaiE
Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:AEW02425.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_72_curated_125
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(147894..150329)
DNA (2436bp) protein (812aa)
Outer membrane protein/protective antigen OMA87 n=1 Tax=Flavobacterium sp. CF136 RepID=J2S4Z4_9FLAO
Outer membrane protein {ECO:0000313|EMBL:BAP33339.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
surface antigen (D15)
scnpilot_p_inoc_scaffold_72_curated_126
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(150381..151154)
DNA (774bp) protein (258aa)
Alpha/beta hydrolase fold protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRA0_CHIPD
alpha/beta hydrolase
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ACU64339.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_72_curated_127
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(151276..152676)
DNA (1401bp) protein (467aa)
manB; phosphoglucosamine mutase (EC:5.4.2.8)
Phosphoglucosamine mutase n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L7D9_SAPGL
Phosphomannomutase {ECO:0000313|EMBL:EJF54875.1}; TaxID=694433 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis DSM 2844.;"
scnpilot_p_inoc_scaffold_72_curated_128
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(152663..153571)
DNA (909bp) protein (303aa)
MscS Mechanosensitive ion channel n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6J5_PEDSD
mechanosensitive ion channel MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ADY51071.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_p_inoc_scaffold_72_curated_129
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(153575..154657)
DNA (1083bp) protein (361aa)
Bacterial peptide chain release factor 2 (BRF-2) n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PV12_CHIPD
peptide chain release factor 2; K02836 peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_72_curated_130
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(154747..155679)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A94C6
Uncharacterized protein {ECO:0000313|EMBL:KIC92537.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_p_inoc_scaffold_72_curated_131
unknown

Not on your lists

comp(155676..155846)
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_72_curated_132
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

155894..157210
DNA (1317bp) protein (439aa)
Processing peptidase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZZS8_MELRP
processing peptidase
Processing peptidase {ECO:0000313|EMBL:AFN74483.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
scnpilot_p_inoc_scaffold_72_curated_133
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

157262..159355
DNA (2094bp) protein (698aa)
Processing peptidase id=4406539 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
Zn-dependent peptidase
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
scnpilot_p_inoc_scaffold_72_curated_134
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

159815..161389
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000372D02C
Uncharacterized protein {ECO:0000313|EMBL:KIC95900.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_p_inoc_scaffold_72_curated_135
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(161825..162982)
DNA (1158bp) protein (386aa)
Alkaline phosphatase {ECO:0000313|EMBL:KFF13442.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
Por secretion system C-terminal sorting domain containing protein id=2837093 bin=GWF1_Flavobacteria_32_7 species=Chryseobacterium sp. CF314 genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
CotH protein
scnpilot_p_inoc_scaffold_72_curated_136
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(163073..164947)
DNA (1875bp) protein (625aa)
Spore coat protein CotH n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2L8_DYAFD
Uncharacterized protein {ECO:0000313|EMBL:KFD39837.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;"
spore coat protein CotH
scnpilot_p_inoc_scaffold_72_curated_137
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(165022..166173)
DNA (1152bp) protein (384aa)
Uncharacterized protein {ECO:0000313|EMBL:KFD38400.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;"
scnpilot_p_inoc_scaffold_72_curated_138
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(166261..166980)
DNA (720bp) protein (240aa)
Uncharacterized protein {ECO:0000313|EMBL:KFD38401.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;"
scnpilot_p_inoc_scaffold_72_curated_139
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(167578..168276)
DNA (699bp) protein (233aa)
HAD superfamily (Subfamily IA) hydrolase, TIGR02254 n=1 Tax=Niabella soli DSM 19437 RepID=H1NSN0_9SPHI
Haloacid dehalogenase {ECO:0000313|EMBL:KIC94752.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
HAD-superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily
scnpilot_p_inoc_scaffold_72_curated_140
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(168283..168597)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK46_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58387.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_72_curated_141
unknown

Not on your lists

168768..169262
DNA (495bp) protein (165aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_72_curated_142
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

169266..170543
DNA (1278bp) protein (426aa)
Putative uncharacterized protein id=4518450 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_p_inoc_scaffold_72_curated_143
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(170610..172043)
DNA (1434bp) protein (478aa)
L-serine dehydratase 1; K01752 L-serine dehydratase [EC:4.3.1.17]
L-serine dehydratase 1 {ECO:0000313|EMBL:ACU63648.1}; EC=4.3.1.17 {ECO:0000313|EMBL:ACU63648.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
L-serine dehydratase 1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI86_CHIPD
scnpilot_p_inoc_scaffold_72_curated_144
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

172229..173266
DNA (1038bp) protein (346aa)
UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
UDP-glucose 4-epimerase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PD60_CHIPD
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ACU57683.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_72_curated_145
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

173995..175182
DNA (1188bp) protein (396aa)
Elongation factor Tu n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUF6_CHIPD
translation elongation factor Tu; K02358 elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_72_curated_146
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(175455..176234)
DNA (780bp) protein (260aa)
peptidase M48 Ste24p; K07387 putative metalloprotease [EC:3.4.24.-]
Peptidase, M48 family n=1 Tax=Capnocytophaga sp. oral taxon 380 str. F0488 RepID=L1NZP7_9FLAO
Peptidase {ECO:0000313|EMBL:KFC24460.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
scnpilot_p_inoc_scaffold_72_curated_147
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(176788..178677)
DNA (1890bp) protein (630aa)
Chaperone protein DnaK n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJS4_CHIPD
chaperone protein DnaK; K04043 molecular chaperone DnaK
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_72_curated_148
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(179191..179901)
DNA (711bp) protein (237aa)
UBA/THIF-type NAD/FAD binding protein n=2 Tax=Elizabethkingia meningoseptica RepID=R9CPE3_ELIME
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:EOR31178.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
UBA/THIF-type NAD/FAD binding protein
scnpilot_p_inoc_scaffold_72_curated_149
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(179934..181046)
DNA (1113bp) protein (371aa)
2-iminoacetate synthase {ECO:0000313|EMBL:AJW65235.1}; EC=4.1.99.19 {ECO:0000313|EMBL:AJW65235.1};; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
Thiazole biosynthesis protein ThiH n=2 Tax=Elizabethkingia anophelis RepID=H0KXK6_9FLAO
thiazole biosynthesis protein ThiH; K03150 thiamine biosynthesis ThiH
scnpilot_p_inoc_scaffold_72_curated_150
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(181049..181831)
DNA (783bp) protein (261aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1246994 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis R26.;"
Thiazole synthase n=2 Tax=Elizabethkingia anophelis RepID=H0KXK7_9FLAO
thiazole-phosphate synthase; K03149 thiamine biosynthesis ThiG
Displaying items 121-150 of 231 in total

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