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scnpilot_p_inoc_scaffold_72_curated_170

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 202863..203282

Top 3 Functional Annotations

Value Algorithm Source
single-stranded DNA-binding protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00035DA10C similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 146.0
  • Bit_score: 115
  • Evalue 3.80e-23
single-strand binding protein; K03111 single-strand DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 152.0
  • Bit_score: 114
  • Evalue 2.00e-23
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.8
  • Coverage: 152.0
  • Bit_score: 114
  • Evalue 9.10e-23

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Taxonomy

Haliscomenobacter hydrossis → Haliscomenobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 420
ATGAGCACCATTCGCAATCACGTACAATTATTGGGATTTGTAGGCCAGGACCCGGAAATCAGAAGCACCGTAACAGGCAAGAAAGTAGCTAAATTCAGCATCGCTACGACAGACAGCTACAGGGACGCAAGCGGTCAATGGCATAACGAAACGACCTGGCACAACATTTCCTGCTGGGAAGCTCTCGCGGAACGCGCGGAACGTCAGGTCAGGAAAGGCAGCCACCTGCTGCTAACGGGAAAGATACGGTACAGGAAGTATACGGACAGCAACAATACAGAGCGGTTCATAACGGAAATCACCCCGAATACCCTCACGCTGCTGGACGCAGGAAGCGCGCGCGCCGGCGCTTCCGCTTCCTCCCGGGACGCAATCCCCGCCTGTAATTCAGAAATGGCAGATGACGATCTTCCGTTTTAG
PROTEIN sequence
Length: 140
MSTIRNHVQLLGFVGQDPEIRSTVTGKKVAKFSIATTDSYRDASGQWHNETTWHNISCWEALAERAERQVRKGSHLLLTGKIRYRKYTDSNNTERFITEITPNTLTLLDAGSARAGASASSRDAIPACNSEMADDDLPF*