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scnpilot_p_inoc_scaffold_114_curated_26

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 30809..31171

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L18 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU87_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 113.0
  • Bit_score: 168
  • Evalue 5.60e-39
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 113.0
  • Bit_score: 168
  • Evalue 1.70e-39
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 113.0
  • Bit_score: 168
  • Evalue 7.80e-39

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 363
ATGGCTAAAACAGCAAAAACAGTTTTACGTCGTCAGAAATTACGTTGGCGCATTCGTAAAAATGTAAACGGAACTTCAGCAAAACCACGCTTATCGGTTTTCCGTTCCAACAAGGACATCTACGCTCAGTTGATCGATGATGCAAGCGGAGTTACACTGGCAGCTGCCAATTCCCGTCAGAAAGATATCGCCGCAGCAACAGGCACCAAATCCGAAATCGCCGCCCTCGTAGGTAAGGCTATCGCGCAGAAAGCCCAGGCCTTAGGTATTGAAACCTGTATCTTTGACCGTGGCGGATACCTGTATCACGGACGTGTTAAATCCCTGGCGGACGGCGCACGTGAAGGCGGACTGAAATTCTAA
PROTEIN sequence
Length: 121
MAKTAKTVLRRQKLRWRIRKNVNGTSAKPRLSVFRSNKDIYAQLIDDASGVTLAAANSRQKDIAAATGTKSEIAALVGKAIAQKAQALGIETCIFDRGGYLYHGRVKSLADGAREGGLKF*