ggKbase home page

scnpilot_p_inoc_scaffold_114_curated_28

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 31858..32043

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L30 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU89_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 61.0
  • Bit_score: 86
  • Evalue 1.10e-14
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 61.0
  • Bit_score: 86
  • Evalue 3.40e-15
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 59.0
  • Bit_score: 93
  • Evalue 9.60e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 186
ATGTCAAAAATAAAAGTAACTCAAGTTAAAAGCTCGATTGACCGCTCTGAGCGTCAAAAGCGTACGCTTATTGCTTTAGGTTTACGTAAATTAAATTCAAGTGTTGAAGTAGAAGCTACTCCCCAGGTTAAAGGTATGGTAGCCAAAGTTCTGCACCTGGTAAAGGTTGAAGAAGTAAACGCCTAA
PROTEIN sequence
Length: 62
MSKIKVTQVKSSIDRSERQKRTLIALGLRKLNSSVEVEATPQVKGMVAKVLHLVKVEEVNA*