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scnpilot_p_inoc_scaffold_720_curated

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Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_720_curated_1
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..885
DNA (885bp) protein (295aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Acidovorax sp. KKS102 RepID=K0HLU7_9BURK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_720_curated_2
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1069..1509)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023786BD
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_720_curated_3
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1636..2595
DNA (960bp) protein (320aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI00023786BC
LysR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_720_curated_4
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2630..3475
DNA (846bp) protein (282aa)
metallophosphoesterase n=1 Tax=Acidovorax radicis RepID=UPI00023786BB
metallophosphoesterase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_720_curated_5
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3587..4009
DNA (423bp) protein (141aa)
universal stress protein UspA n=1 Tax=Acidovorax radicis RepID=UPI00023786BA
UspA domain-containing protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_720_curated_6
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4190..4645
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HLU3_9BURK
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_720_curated_7
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4703..5641
DNA (939bp) protein (313aa)
fasciclin n=1 Tax=Acidovorax radicis RepID=UPI00023786B8
beta-Ig-H3/fasciclin
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_720_curated_8
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5739..6353)
DNA (615bp) protein (205aa)
TetR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI00023786B7
TetR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_720_curated_9
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6438..7358)
DNA (921bp) protein (307aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI00023786B3
chromosome replication initiation inhibitor protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_720_curated_10
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7535..8872
DNA (1338bp) protein (446aa)
D-amino acid dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI00023786B2
D-amino-acid dehydrogenase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_720_curated_11
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8886..9566)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023786AF
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_720_curated_12
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9655..10314
DNA (660bp) protein (220aa)
TetR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI00023786AE
TetR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_720_curated_13
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10311..10886
DNA (576bp) protein (192aa)
NAD(P)H dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI00023786AD
NAD(P)H dehydrogenase (quinone)
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_720_curated_14
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10891..11703)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023786AC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_720_curated_15
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11763..12551)
DNA (789bp) protein (263aa)
alpha/beta hydrolase n=1 Tax=Acidovorax radicis RepID=UPI00023786AB
alpha/beta fold family hydrolase
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_720_curated_16
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12646..13167
DNA (522bp) protein (174aa)
flavin reductase n=1 Tax=Acidovorax radicis RepID=UPI00023786AA
flavin reductase domain-containing protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_720_curated_17
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13389..13880
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037B82CA
hypothetical protein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
scnpilot_p_inoc_scaffold_720_curated_18
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14083..15366)
DNA (1284bp) protein (428aa)
C4-dicarboxylate transporter id=1326790 bin=GWE1_T_denit_62_9 species=Advenella kashmirensis genus=Advenella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
C4-dicarboxylate transporter; K11690 C4-dicarboxylate transporter, DctM subunit
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
scnpilot_p_inoc_scaffold_720_curated_19
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15363..15890)
DNA (528bp) protein (176aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TH44_TISMK
tripartite AtP-independent periplasmic transporter subunit DctQ
Tax=CG_Rhodof_02
scnpilot_p_inoc_scaffold_720_curated_20
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15959..16945)
DNA (987bp) protein (329aa)
C4-dicarboxylate-binding protein id=1326787 bin=GWE1_T_denit_62_9 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
putative c4-dicarboxylate-binding protein; K11688 C4-dicarboxylate-binding protein DctP
Tax=CG_Rhodof_04
scnpilot_p_inoc_scaffold_720_curated_21
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17074..18114)
DNA (1041bp) protein (347aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YD6_RHOFD
TRAP dicarboxylate transporter subunit DctP; K11688 C4-dicarboxylate-binding protein DctP
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:ABD69217.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
scnpilot_p_inoc_scaffold_720_curated_22
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18155..20260
DNA (2106bp) protein (702aa)
multi-sensor signal transduction histidine kinase; K11711 two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
Multi-sensor signal transduction histidine kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YD5_RHOFD
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
scnpilot_p_inoc_scaffold_720_curated_23
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20264..20908
DNA (645bp) protein (215aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YD4_RHOFD
two component LuxR family transcriptional regulator; K11712 two-component system, LuxR family, response regulator DctR
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
scnpilot_p_inoc_scaffold_720_curated_24
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20931..21197)
DNA (267bp) protein (89aa)
cell division topological specificity factor MinE n=1 Tax=Acidovorax radicis RepID=UPI00023786A8
cell division topological specificity factor MinE
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_720_curated_25
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21201..22019)
DNA (819bp) protein (273aa)
Site-determining protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KE01_9BURK
septum site-determining protein MinD
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_720_curated_26
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22064..22825)
DNA (762bp) protein (254aa)
septum site-determining protein MinC n=1 Tax=Acidovorax radicis RepID=UPI00023786A6
septum site-determining protein minc
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_720_curated_27
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22990..23292)
DNA (303bp) protein (101aa)
Proteophosphoglycan ppg4 n=2 Tax=Variovorax paradoxus RepID=C5CMV0_VARPS
proteophosphoglycan ppg4
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_720_curated_28
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23499..24332)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y529_RAMTT
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_720_curated_29
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24575..24751
DNA (177bp) protein (59aa)
Transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXY0_9BURK
transporter
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_720_curated_30
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25050..26528
DNA (1479bp) protein (493aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Acidovorax radicis RepID=UPI00023786A5
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
Displaying items 1-30 of 77 in total

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