ggKbase home page

scnpilot_p_inoc_scaffold_820_curated

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_820_curated_1
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108..713)
DNA (606bp) protein (202aa)
porin n=1 Tax=Acidovorax radicis RepID=UPI0002377C0F
porin
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_820_curated_2
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1194..2402)
DNA (1209bp) protein (403aa)
UPI0003CDF514 related cluster n=2 Tax=unknown RepID=UPI0003CDF514
FAD dependent oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_820_curated_3
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2821..3657)
DNA (837bp) protein (279aa)
family 2 glycosyl transferase n=1 Tax=Acidovorax radicis RepID=UPI0002377C14
family 2 glycosyl transferase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_820_curated_4
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3837..6014)
DNA (2178bp) protein (726aa)
ligand-gated channel protein n=1 Tax=Acidovorax radicis RepID=UPI0002377C15
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_820_curated_5
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6155..8290)
DNA (2136bp) protein (712aa)
ligand-gated channel protein n=1 Tax=Acidovorax radicis RepID=UPI0002377C16
tonb-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_820_curated_6
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8454..9191)
DNA (738bp) protein (246aa)
TonB-dependent receptor n=1 Tax=Acidovorax radicis RepID=UPI0002377C17
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_820_curated_7
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9377..11599)
DNA (2223bp) protein (741aa)
TonB-denpendent receptor n=1 Tax=Acidovorax radicis RepID=UPI0002377C18
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_820_curated_8
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11625..11885)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377C19
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_820_curated_9
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11882..13114)
DNA (1233bp) protein (411aa)
peptidase n=1 Tax=Acidovorax radicis RepID=UPI0002377C1A
pepsy-associated tm helix domain-containing protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_820_curated_10
unknown

Not on your lists

13533..14081
DNA (549bp) protein (183aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_820_curated_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14486..15031
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXQ6_VARPS
hypothetical protein; K09962 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS20762.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
scnpilot_p_inoc_scaffold_820_curated_12
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15206..17380)
DNA (2175bp) protein (725aa)
TonB-dependent siderophore receptor n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWQ5_9BURK
TonB-dependent siderophore receptor
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_820_curated_13
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17553..17888)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HQL2_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_820_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18135..18845)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HR80_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45478.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_820_curated_15
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18898..19101)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRD8_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU97849.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_820_curated_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19098..19289)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWL3_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47313.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_820_curated_17
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19293..19838)
DNA (546bp) protein (182aa)
Phage virion morphogenesis protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRD9_ALIDB
phage virion morphogenesis protein
Phage virion morphogenesis protein {ECO:0000313|EMBL:ADU97850.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_820_curated_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19945..21147)
DNA (1203bp) protein (401aa)
Head morphogenesis protein SPP1 gp7 n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRE0_ALIDB
head morphogenesis protein spp1 gp7
Head morphogenesis protein SPP1 gp7 {ECO:0000313|EMBL:ADU97851.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_820_curated_19
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21140..22717)
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WPU7_DELAC
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_p_inoc_scaffold_820_curated_20
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22710..24137)
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WTD8_DELAC
Large terminase subunit
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_p_inoc_scaffold_820_curated_21
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24137..24679)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7W7_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47314.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_820_curated_22
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24683..25006)
DNA (324bp) protein (108aa)
Phage-like protein n=1 Tax=Comamonas testosteroni S44 RepID=D8D844_COMTE
Phage-like protein {ECO:0000313|EMBL:EFI60720.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;"
hypothetical protein
scnpilot_p_inoc_scaffold_820_curated_23
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25003..25356)
DNA (354bp) protein (118aa)
Putative phage-related exported protein n=1 Tax=Comamonas testosteroni S44 RepID=D8D845_COMTE
Putative phage-related exported protein {ECO:0000313|EMBL:EFI60721.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;"
phage-like protein exported protein
scnpilot_p_inoc_scaffold_820_curated_24
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25353..25889)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2T1_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47317.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_820_curated_25
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25886..26509)
DNA (624bp) protein (208aa)
Lytic transglycosylase catalytic n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZS7_ALIDB
lytic transglycosylase catalytic
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_p_inoc_scaffold_820_curated_26
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26509..26877)
DNA (369bp) protein (123aa)
Putative phage-related membrane protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZS6_ALIDB
phage-related membrane protein
Putative phage-related membrane protein {ECO:0000313|EMBL:ADU99811.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_820_curated_27
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26955..27404)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KJQ3_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJE51418.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
scnpilot_p_inoc_scaffold_820_curated_28
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27940..28326)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2T5_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47322.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_820_curated_29
Methylophaga frappieri, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28335..28976)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Methylobacter sp. UW 659-2-H10 RepID=UPI000369B409
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ01989.1}; TaxID=754477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7).;"
scnpilot_p_inoc_scaffold_820_curated_30
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29026..29226
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZS2_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99807.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Displaying items 1-30 of 64 in total

View Taxonomy