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scnpilot_p_inoc_scaffold_475_curated

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_475_curated_1
unknown

Not on your lists

comp(1..66)
DNA (66bp) protein (22aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_475_curated_2
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(29..550)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AYB9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EIQ00011.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_475_curated_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(588..1490)
DNA (903bp) protein (301aa)
type III restriction protein res subunit; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3]
Type III restriction protein res subunit id=1261954 bin=GWE1_Burkholderiales_65_30 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_475_curated_4
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1721..3406
DNA (1686bp) protein (562aa)
long-chain-fatty-acid--CoA ligase (EC:2.3.1.86); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
long-chain fatty acid--CoA ligase n=1 Tax=Acidovorax radicis RepID=UPI0002376645
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_475_curated_5
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3526..3900)
DNA (375bp) protein (125aa)
pilus biosynthesis protein PilZ n=1 Tax=Acidovorax radicis RepID=UPI0002377EE7
type IV pilus assembly PilZ
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_475_curated_6
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4125..7007
DNA (2883bp) protein (961aa)
diguanylate cyclase n=1 Tax=Acidovorax radicis RepID=UPI0002377EE8
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_475_curated_7
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7240..7731
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377EE9
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_475_curated_8
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7861..8637
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377EEA
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_475_curated_9
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8775..9212
DNA (438bp) protein (146aa)
universal stress protein UspA n=1 Tax=Acidovorax radicis RepID=UPI0002377EEB
UspA domain-containing protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_475_curated_10
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9300..10133)
DNA (834bp) protein (278aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0I8_9BURK
scnpilot_p_inoc_scaffold_475_curated_11
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10195..11178)
DNA (984bp) protein (328aa)
LacI family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002377EEC
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_475_curated_12
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11355..12539)
DNA (1185bp) protein (395aa)
beta-ketothiolase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Beta-ketothiolase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0I6_9BURK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_475_curated_13
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12633..13394)
DNA (762bp) protein (254aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0I5_9BURK
short-chain dehydrogenase/reductase sdr
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_475_curated_14
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13434..13949)
DNA (516bp) protein (172aa)
MarR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002377EEF
MarR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_475_curated_15
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14037..14921
DNA (885bp) protein (295aa)
ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI0002377EF0
hypothetical protein; K15269 probable blue pigment (indigoidine) exporter
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_475_curated_16
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15040..16701)
DNA (1662bp) protein (554aa)
methyl-accepting chemotaxis protein n=1 Tax=Acidovorax radicis RepID=UPI0002378270
methyl-accepting chemotaxis sensory transducer
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_475_curated_17
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16788..17861)
DNA (1074bp) protein (358aa)
sulfotransferase n=1 Tax=Acidovorax radicis RepID=UPI0002378271
sulfotransferase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_475_curated_18
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17858..18883)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002378272
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_475_curated_19
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18912..19592)
DNA (681bp) protein (227aa)
adenylylsulfate kinase; K00860 adenylylsulfate kinase [EC:2.7.1.25]
adenylylsulfate kinase n=1 Tax=Acidovorax radicis RepID=UPI0002378273
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_475_curated_20
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19644..20198)
DNA (555bp) protein (185aa)
acyl-homoserine-lactone synthase (EC:2.3.1.184)
N-acylhomoserine lactone synthase n=1 Tax=Acidovorax radicis RepID=UPI0002378274
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_475_curated_21
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20418..21131
DNA (714bp) protein (238aa)
LuxR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002378275
LuxR family transcriptional regulator; K07782 LuxR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_475_curated_22
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21190..21633
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002378276
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_475_curated_23
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21700..22386)
DNA (687bp) protein (229aa)
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
pseudouridine synthase n=1 Tax=Acidovorax radicis RepID=UPI0002378277
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_475_curated_24
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22373..24598)
DNA (2226bp) protein (742aa)
histidine kinase n=1 Tax=Acidovorax radicis RepID=UPI0002378278
PAS/PAC sensor hybrid histidine kinase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_475_curated_25
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24905..25567
DNA (663bp) protein (221aa)
nitroreductase n=1 Tax=Acidovorax radicis RepID=UPI0002378279
nitroreductase
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_475_curated_26
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25642..26994)
DNA (1353bp) protein (451aa)
MFS transporter n=1 Tax=Acidovorax radicis RepID=UPI000237827A
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_475_curated_27
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26984..28264)
DNA (1281bp) protein (427aa)
hypothetical protein; K11941 glucans biosynthesis protein C [EC:2.1.-.-]
acyltransferase n=1 Tax=Acidovorax radicis RepID=UPI000237827B
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_475_curated_28
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28337..29377)
DNA (1041bp) protein (347aa)
MerR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI000237827C
antibiotic resistance transcriptional regulator, MerR family
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_475_curated_29
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29382..29789)
DNA (408bp) protein (136aa)
peptidyl-prolyl isomerase (EC:5.2.1.8); K03772 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1N2_9BURK
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_475_curated_30
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30016..31263
DNA (1248bp) protein (416aa)
soxC; sulfite oxidase (EC:1.8.3.1)
Sulfite oxidase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1N3_9BURK
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
Displaying items 1-30 of 70 in total

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