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scnpilot_p_inoc_scaffold_145_curated

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Displaying items 1-30 of 333 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_145_curated_1
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..210)
DNA (210bp) protein (70aa)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
rumA; 23S rRNA 5-methyluridine methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
23S rRNA methyltransferase n=1 Tax=Aeromonas caviae RepID=UPI0002198303
scnpilot_p_inoc_scaffold_145_curated_2
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

480..2018
DNA (1539bp) protein (513aa)
two component system hybrid sensor histidine kinase/response regulator; K07678 two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377F77
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_145_curated_3
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2071..2763)
DNA (693bp) protein (231aa)
Methyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTK5_9BURK
methyltransferase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_145_curated_4
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2760..4115)
DNA (1356bp) protein (452aa)
zinc protease n=1 Tax=Acidovorax radicis RepID=UPI0002377F75
peptidase M16 domain-containing protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_145_curated_5
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4137..5582)
DNA (1446bp) protein (482aa)
Peptidase M16 domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTK3_9BURK
peptidase M16 domain-containing protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_145_curated_6
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5610..6986
DNA (1377bp) protein (459aa)
Signal recognition particle receptor FtsY n=1 Tax=Acidovorax sp. KKS102 RepID=K0HX68_9BURK
signal recognition particle-docking protein FtsY
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_145_curated_7
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7120..9789
DNA (2670bp) protein (890aa)
histidine kinase n=1 Tax=Acidovorax radicis RepID=UPI0002377F72
sensory box protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_145_curated_8
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9902..10966
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377F71
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_145_curated_9
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11037..11384)
DNA (348bp) protein (116aa)
cytochrome C biogenesis protein n=1 Tax=Acidovorax radicis RepID=UPI0002377F70
cuta1 divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_145_curated_10
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12097..13038
DNA (942bp) protein (314aa)
RNA polymerase sigma factor RpoH n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTJ9_9BURK
RNA polymerase sigma-32 subunit RpoH
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_145_curated_11
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13155..14189
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3C6_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_145_curated_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14441..15043
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000364D8E7
Uncharacterized protein {ECO:0000313|EMBL:GAD23665.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
cyclic nucleotide-binding protein
scnpilot_p_inoc_scaffold_145_curated_13
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15062..16780)
DNA (1719bp) protein (573aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003821A31
PAS/PAC sensor-containing diguanylate cyclase {ECO:0000313|EMBL:GAO20835.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
scnpilot_p_inoc_scaffold_145_curated_14
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17170..17787)
DNA (618bp) protein (206aa)
photosynthetic protein synthase I n=1 Tax=Acidovorax radicis RepID=UPI0002376272
electron transport protein SCO1/SenC; K07152
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_145_curated_15
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17796..18698)
DNA (903bp) protein (301aa)
protoheme IX farnesyltransferase (EC:2.5.1.-)
protoheme IX farnesyltransferase n=1 Tax=Acidovorax radicis RepID=UPI0002376271
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_145_curated_16
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18695..19876)
DNA (1182bp) protein (394aa)
cytochrome oxidase assembly protein n=1 Tax=Acidovorax radicis RepID=UPI0002376270
cytochrome oxidase assembly
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_145_curated_17
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19876..20619)
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTJ4_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_145_curated_18
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20561..21346)
DNA (786bp) protein (262aa)
transmembrane cytochrome oxidase n=1 Tax=Acidovorax radicis RepID=UPI000237626E
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_145_curated_19
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21362..21586
DNA (225bp) protein (75aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI000237626D
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_145_curated_20
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21704..22585)
DNA (882bp) protein (294aa)
Cytochrome c oxidase subunit III n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8K9_9BURK
cytochrome c oxidase subunit III
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_145_curated_21
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22651..22875)
DNA (225bp) protein (75aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI0002376619
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_145_curated_22
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22872..23507)
DNA (636bp) protein (212aa)
cytochrome C oxidase assembly protein n=1 Tax=Acidovorax radicis RepID=UPI000237661A
cytochrome C oxidase assembly protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_145_curated_23
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23521..23631)
DNA (111bp) protein (37aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTI8_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_145_curated_24
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23643..25274)
DNA (1632bp) protein (544aa)
Cytochrome-c oxidase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTI7_9BURK
cytochrome-c oxidase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_145_curated_25
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25305..26474)
DNA (1170bp) protein (390aa)
Cytochrome c oxidase subunit 2 n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8L3_9BURK
cytochrome c oxidase subunit II
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_145_curated_26
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26534..27010)
DNA (477bp) protein (159aa)
Integral membrane protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EC11_9BURK
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_145_curated_27
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27020..27139)
DNA (120bp) protein (40aa)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_145_curated_28
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27162..28067)
DNA (906bp) protein (302aa)
Biotin synthesis protein BioC n=1 Tax=Acidovorax sp. KKS102 RepID=K0IDZ3_9BURK
biotin synthesis protein BioC
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_145_curated_29
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28091..28813
DNA (723bp) protein (241aa)
Phosphoribosyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTI3_9BURK
phosphoribosyltransferase
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_145_curated_30
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28884..29426
DNA (543bp) protein (181aa)
tRNA methyltransferase n=1 Tax=Acidovorax radicis RepID=UPI0002376981
tRNA/rRNA methyltransferase SpoU
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
Displaying items 1-30 of 333 in total

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