ggKbase home page

scnpilot_p_inoc_scaffold_1458_curated

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1458_curated_1
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1677)
DNA (1677bp) protein (559aa)
peptidase n=1 Tax=Acidovorax radicis RepID=UPI0002377C22
PepSY-associated TM helix domain-containing protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_1458_curated_2
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1674..1982)
DNA (309bp) protein (103aa)
iron transporter n=1 Tax=Acidovorax radicis RepID=UPI0002377C23
iron uptake protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_1458_curated_3
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2463..2939)
DNA (477bp) protein (159aa)
Bacterioferritin n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8H6_9BURK
bacterioferritin
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_1458_curated_4
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3123..3941)
DNA (819bp) protein (273aa)
iron permease n=1 Tax=Acidovorax radicis RepID=UPI0002377F92
high-affinity Fe2+/Pb2+ permease; K07243 high-affinity iron transporter
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_1458_curated_5
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4356..4931
DNA (576bp) protein (192aa)
Alkyl hydroperoxide reductase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWQ9_9BURK
alkyl hydroperoxide reductase
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_1458_curated_6
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5250..6869
DNA (1620bp) protein (540aa)
alkyl hydroperoxide reductase subunit F n=1 Tax=Acidovorax radicis RepID=UPI0002377F94
alkyl hydroperoxide reductase subunit F
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_1458_curated_7
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7258..7899)
DNA (642bp) protein (214aa)
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED n=1 Tax=Acidovorax sp. CF316 RepID=J1EC60_9BURK
putative hydrolase of the HAD superfamily
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_1458_curated_8
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8017..8475)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000360566F
N-acetyltransferase GCN5
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_1458_curated_9
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8764..11040
DNA (2277bp) protein (759aa)
TonB-denpendent receptor n=1 Tax=Acidovorax radicis RepID=UPI0002377F99
tonb-dependent hemoglobin/transferrin/lactoferrin family receptor; K02014 iron complex outermembrane recepter protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_1458_curated_10
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11082..11438
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377F9A
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_1458_curated_11
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11435..12562
DNA (1128bp) protein (376aa)
hemin receptor n=1 Tax=Acidovorax radicis RepID=UPI0002377F9B
hemin-degrading family protein; K07225 putative hemin transport protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_1458_curated_12
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12552..13454
DNA (903bp) protein (301aa)
ABC transporter substrate-binding protein n=1 Tax=Acidovorax radicis RepID=UPI0002377F9C
Twin-arginine translocation pathway signal; K02016 iron complex transport system substrate-binding protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_1458_curated_13
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13451..14533
DNA (1083bp) protein (361aa)
ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI0002377F9D
hemin transporter permease; K02015 iron complex transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_1458_curated_14
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14530..15360
DNA (831bp) protein (277aa)
hemin transporter ATP-bindingprotein; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component n=1 Tax=Acidovorax sp. CF316 RepID=J1EK21_9BURK
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_1458_curated_15
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15535..15891
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377F9F
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_1458_curated_16
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16070..17347
DNA (1278bp) protein (426aa)
Outer membrane protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KN52_9BURK
outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_1458_curated_17
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17385..17957
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377FA1
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_1458_curated_18
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17954..19075
DNA (1122bp) protein (374aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI0002377FA2
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_1458_curated_19
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19085..22204
DNA (3120bp) protein (1040aa)
multidrug transporter AcrB n=1 Tax=Acidovorax radicis RepID=UPI0002377FA3
CzcA family heavy metal efflux pump; K07239 heavy-metal exporter, HME family
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_1458_curated_20
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22277..22675
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377FA4
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
Displaying 20 items

View Taxonomy