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scnpilot_p_inoc_scaffold_643_curated

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_643_curated_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

311..625
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000381D809
DNA-binding protein H-NS {ECO:0000313|EMBL:GAD22055.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
histone-like nucleoid-structuring protein H-NS; K03746 DNA-binding protein H-NS
scnpilot_p_inoc_scaffold_643_curated_2
Azotobacter vinelandii, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(634..981)
DNA (348bp) protein (116aa)
Bacterial regulatory protein, LysR family n=3 Tax=Azotobacter vinelandii RepID=C1DR65_AZOVD
LysR family regulatory protein
LysR family regulatory protein {ECO:0000313|EMBL:AGK21442.1}; TaxID=1283331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter vinelandii CA6.;"
scnpilot_p_inoc_scaffold_643_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1241..2665)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4ML03_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89893.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein; K07221 phosphate-selective porin OprO and OprP rbh
scnpilot_p_inoc_scaffold_643_curated_4
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2838..3209)
DNA (372bp) protein (124aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ID94_XANP2
Cupin {ECO:0000313|EMBL:EYC52144.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
cupin
scnpilot_p_inoc_scaffold_643_curated_5
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3480..4451
DNA (972bp) protein (324aa)
Transcriptional regulator, LysR family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ID93_XANP2
LysR family transcriptional regulator; K03566 LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABS65986.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
scnpilot_p_inoc_scaffold_643_curated_6
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4815..5429)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S701_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KDP85114.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
hypothetical protein
scnpilot_p_inoc_scaffold_643_curated_7
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5426..6124)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UAW2_ADVKW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK62150.1}; TaxID=1036672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001); (Tetrathiobacter kashmirensis).;"
scnpilot_p_inoc_scaffold_643_curated_8
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6220..6849)
DNA (630bp) protein (210aa)
Cbb3-type cytochrome c oxidase subunit III n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GN76_PUSST
cbb3-type cytochrome c oxidase subunit III
Cbb3-type cytochrome c oxidase subunit III {ECO:0000313|EMBL:AEC20362.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
scnpilot_p_inoc_scaffold_643_curated_9
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6818..7531)
DNA (714bp) protein (238aa)
Cytochrome C oxidase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QYL6_RALPI
Cytochrome C oxidase {ECO:0000313|EMBL:AGW94351.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
cytochrome C oxidase, mono-heme subunit/FixO; K00405 cytochrome c oxidase cbb3-type subunit II
scnpilot_p_inoc_scaffold_643_curated_10
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7536..9164)
DNA (1629bp) protein (543aa)
cytochrome C oxidase subunit transmembrane protein; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1]
Cytochrome C oxidase subunit transmembrane protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S6Z8_9BURK
Putative cbb3-type cytochrome c oxidase subunit 1 {ECO:0000313|EMBL:AHG64602.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;"
scnpilot_p_inoc_scaffold_643_curated_11
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9439..10851
DNA (1413bp) protein (471aa)
Transcriptional regulator, GntR family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VP24_POLNA
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABM37402.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
scnpilot_p_inoc_scaffold_643_curated_12
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11085..13070)
DNA (1986bp) protein (662aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=U8YSG2_PSEAI
Type VI secretion protein {ECO:0000313|EMBL:EWC39956.1}; TaxID=1218352 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri KOS6.;"
hypothetical protein
scnpilot_p_inoc_scaffold_643_curated_13
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13519..14118)
DNA (600bp) protein (200aa)
Plasmid conjugal transfer transmembrane protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C055_9BURK
Plasmid conjugal transfer transmembrane protein {ECO:0000313|EMBL:EHL21971.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
traF; plasmid conjugal transfer transmembrane protein
scnpilot_p_inoc_scaffold_643_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14115..14672)
DNA (558bp) protein (186aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=A9BR43_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX33101.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_p_inoc_scaffold_643_curated_15
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14669..14941)
DNA (273bp) protein (91aa)
parB partition protein n=1 Tax=Pseudomonas aeruginosa RepID=UPI00036E8C1D
ParB partition protein {ECO:0000313|EMBL:KEX89632.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Arthrobacter siderocapsulatus).;"
hypothetical protein
scnpilot_p_inoc_scaffold_643_curated_16
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14938..15576)
DNA (639bp) protein (213aa)
Plasmid partitioning protein n=2 Tax=Pseudomonas aeruginosa RepID=U8EF75_PSEAI
Cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:ACD27748.1}; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12J).;"
scnpilot_p_inoc_scaffold_643_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15866..16723)
DNA (858bp) protein (286aa)
RepA replication protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00035D78A4
replication initiator and transcription repressor protein
Replication initiator and transcription repressor protein {ECO:0000313|EMBL:AFU46604.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_643_curated_18
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16750..17031)
DNA (282bp) protein (94aa)
Putative transcriptional regulator (DNA binding protein) n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LNA9_RALME
putative transcriptional regulator (DNA binding protein)
Putative transcriptional regulator (DNA binding protein) {ECO:0000313|EMBL:ABF08367.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
scnpilot_p_inoc_scaffold_643_curated_19
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17317..20277)
DNA (2961bp) protein (987aa)
Transposase Tn3 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12AL3_POLSJ
Transposase Tn3 {ECO:0000313|EMBL:ABE44429.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
transposase Tn3
scnpilot_p_inoc_scaffold_643_curated_20
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20603..21340
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00031C280C
metallophosphoesterase
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
scnpilot_p_inoc_scaffold_643_curated_21
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22463..23497)
DNA (1035bp) protein (345aa)
Aldo/keto reductase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IDW6_BEII9
Aldo/keto reductase {ECO:0000313|EMBL:KGM34939.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
aldo/keto reductase
scnpilot_p_inoc_scaffold_643_curated_22
Pseudomonas sp. GM49, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23593..23991
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM49 RepID=J3GU23_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EJM75022.1}; TaxID=1144331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM49.;"
hypothetical protein
scnpilot_p_inoc_scaffold_643_curated_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24007..24486
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0003168FA5
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
scnpilot_p_inoc_scaffold_643_curated_24
unknown

Not on your lists

comp(24537..25013)
DNA (477bp) protein (159aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_643_curated_25
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25183..25335)
DNA (153bp) protein (51aa)
Arsenical resistance protein ArsH n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTF2_ALIDB
arsenical resistance protein arsh; K11811 arsenical resistance protein ArsH
Arsenical resistance protein ArsH {ECO:0000313|EMBL:ADV00426.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_643_curated_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25383..25934)
DNA (552bp) protein (184aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
Uncharacterized peroxidase-related enzyme n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V645_VARPE
hypothetical protein
scnpilot_p_inoc_scaffold_643_curated_27
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26060..26929
DNA (870bp) protein (290aa)
Transcriptional regulator n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U9N1_ALCXX
Transcriptional activator FtrA {ECO:0000313|EMBL:CKI10529.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
Transcriptional regulator, AraC family
scnpilot_p_inoc_scaffold_643_curated_28
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27027..27290
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Comamonas sp. B-9 RepID=UPI000395D876
Uncharacterized protein {ECO:0000313|EMBL:ERI34146.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_643_curated_29
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27493..28752
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q11ZQ0_POLSJ
Uncharacterized protein {ECO:0000313|EMBL:GAO22563.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_643_curated_30
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29160..29564)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTC9_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL24409.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
Displaying items 1-30 of 52 in total

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