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scnpilot_p_inoc_scaffold_642_curated

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_642_curated_1
unknown

Not on your lists

comp(2..61)
DNA (60bp) protein (20aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_642_curated_2
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(207..1406)
DNA (1200bp) protein (400aa)
Phage integrase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7Q0_9BURK
phage integrase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_642_curated_3
Marinobacter salarius, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1879..2475)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA007 RepID=U9P617_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AHI33439.1}; TaxID=1420917 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter salarius.;"
hypothetical protein
scnpilot_p_inoc_scaffold_642_curated_4
unknown

Not on your lists

3001..3216
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_642_curated_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3295..3549
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GAD6_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO24684.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_642_curated_6

Not on your lists

3702..5336
DNA (1635bp) protein (545aa)
Putative helicase n=1 Tax=mine drainage metagenome RepID=E6QQ53_9ZZZZ
Putative helicase {ECO:0000313|EMBL:CBI09374.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_642_curated_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5693..5938)
DNA (246bp) protein (82aa)
Putative transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2SX98_9BURK
Putative transcriptional regulator {ECO:0000313|EMBL:EJL70267.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative transcriptional regulator, XRE family
scnpilot_p_inoc_scaffold_642_curated_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6024..6557
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GAD2_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO24688.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_642_curated_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6745..7143
DNA (399bp) protein (133aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO24689.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_642_curated_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7140..8477
DNA (1338bp) protein (446aa)
Integrase family protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GAD1_ALIDK
integrase family protein
Integrase family protein {ECO:0000313|EMBL:AEB83486.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_p_inoc_scaffold_642_curated_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8474..9394
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEN9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97930.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_p_inoc_scaffold_642_curated_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9402..9692
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GAC9_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB83484.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_p_inoc_scaffold_642_curated_13
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10655..11275
DNA (621bp) protein (207aa)
aromatic ring-opening dioxygenase LigA n=1 Tax=Acidovorax radicis RepID=UPI00023751CD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_642_curated_14
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11386..12003
DNA (618bp) protein (206aa)
aromatic ring-opening dioxygenase LigA n=1 Tax=Acidovorax radicis RepID=UPI00023751CE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_642_curated_15
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12119..15037
DNA (2919bp) protein (973aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023751CF
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_642_curated_16
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15034..15675
DNA (642bp) protein (214aa)
rhizosphere induced protein RhiB n=1 Tax=Acidovorax radicis RepID=UPI00023751D0
rhiB; putative rhizosphere induced protein RhiB
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_642_curated_17
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15718..17133
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023751D1
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_642_curated_18
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17108..17977
DNA (870bp) protein (290aa)
FkbM family methyltransferase n=1 Tax=Acidovorax radicis RepID=UPI00023751D2
FkbM family methyltransferase
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_642_curated_19
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17978..20284
DNA (2307bp) protein (769aa)
putative glycosyltransferase (EC:2.4.-.-)
glycosyl transferase n=1 Tax=Acidovorax radicis RepID=UPI00023751D3
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_642_curated_20
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20297..21808)
DNA (1512bp) protein (504aa)
serine/threonine protein kinase n=1 Tax=Acidovorax radicis RepID=UPI00023751D4
serine/threonine protein kinase
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_642_curated_21
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21826..22821)
DNA (996bp) protein (332aa)
signal peptide protein n=1 Tax=Acidovorax radicis RepID=UPI00023751D5
putative FHA-domain-containing protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_642_curated_22
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23341..24009
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023751D6
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_642_curated_23
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24014..24652
DNA (639bp) protein (213aa)
lysozyme n=1 Tax=Acidovorax radicis RepID=UPI00023751D7
glycoside hydrolase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_642_curated_24
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24710..26458
DNA (1749bp) protein (583aa)
Putative uncharacterized protein n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CKK0_9RHOB
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_642_curated_25
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26731..29082)
DNA (2352bp) protein (784aa)
histidine kinase n=1 Tax=Acidovorax radicis RepID=UPI000237551F
multi-sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_642_curated_26
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29125..30888)
DNA (1764bp) protein (588aa)
iron dicitrate transport regulator FecR n=1 Tax=Acidovorax radicis RepID=UPI0002375520
fecr protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_642_curated_27
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30969..31667)
DNA (699bp) protein (233aa)
PadR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002375521
winged helix family two component transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_642_curated_28
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31765..32829)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375522
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_642_curated_29
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32838..33107)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375523
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_642_curated_30
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33299..35314
DNA (2016bp) protein (672aa)
adenylate cyclase protein (EC:4.6.1.1)
Family 3 adenylate cyclase n=1 Tax=Acidovorax sp. CF316 RepID=J0KCY9_9BURK
Family 3 adenylate cyclase {ECO:0000313|EMBL:EJE51465.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
Displaying items 1-30 of 79 in total

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