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scnpilot_p_inoc_scaffold_2048_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2048_curated_1
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(221..1120)
DNA (900bp) protein (300aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI00023754D5
LysR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_2048_curated_2
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1187..2779
DNA (1593bp) protein (531aa)
benzoylformate decarboxylase (EC:4.1.1.7); K01576 benzoylformate decarboxylase [EC:4.1.1.7]
benzoylformate decarboxylase n=1 Tax=Acidovorax radicis RepID=UPI00023754D4
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_2048_curated_3
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2874..3875
DNA (1002bp) protein (334aa)
ABC transporter substrate-binding protein n=1 Tax=Acidovorax radicis RepID=UPI00023754D3
tctC; extracytoplasmic binding receptor
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_2048_curated_4
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3947..4360
DNA (414bp) protein (138aa)
nucleoside diphosphate kinase regulator n=1 Tax=Acidovorax radicis RepID=UPI00023754D2
GreA/GreB family elongation factor; K06140 regulator of nucleoside diphosphate kinase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_2048_curated_5
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4618..5019
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023754D1
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_2048_curated_6
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5042..6139)
DNA (1098bp) protein (366aa)
acyltransferase n=1 Tax=Acidovorax radicis RepID=UPI00023754D0
acyltransferase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_2048_curated_7
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6343..6945
DNA (603bp) protein (201aa)
ArsR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI00023754CF
MarR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_2048_curated_8
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6950..8317
DNA (1368bp) protein (456aa)
cytochrome d ubiquinol oxidase subunit I; K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-]
cytochrome D ubiquinol oxidase subunit I n=1 Tax=Acidovorax radicis RepID=UPI00023754CE
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_2048_curated_9
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8328..9338
DNA (1011bp) protein (337aa)
cytochrome bd-II oxidase subunit II; K00426 cytochrome d ubiquinol oxidase subunit II [EC:1.10.3.-]
cytochrome BD ubiquinol oxidase subunit II n=1 Tax=Acidovorax radicis RepID=UPI00023754CD
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_2048_curated_10
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9348..10481)
DNA (1134bp) protein (378aa)
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Acidovorax radicis RepID=UPI00023754CC
branched-chain amino acid ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_2048_curated_11
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10733..11686)
DNA (954bp) protein (318aa)
2-nitropropane dioxygenase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C195_9BURK
2-nitropropane dioxygenase
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_2048_curated_12
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11824..13614)
DNA (1791bp) protein (597aa)
Acyl-CoA dehydrogenase-like protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C196_9BURK
acyl-CoA dehydrogenase-like protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_2048_curated_13
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13691..14623)
DNA (933bp) protein (311aa)
Electron transfer flavoprotein subunit alpha n=1 Tax=Acidovorax sp. NO-1 RepID=H0C197_9BURK
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:EHL21752.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
electron transfer flavoprotein subunit alpha
scnpilot_p_inoc_scaffold_2048_curated_14
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

14829..15263
DNA (435bp) protein (145aa)
DeoR family transcriptional regulator id=12557125 bin=CNBR_ACIDO species=Patulibacter americanus genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
transcriptional regulator
Tax=RBG_16_RIF_CHLX_72_14_curated
Displaying 14 items

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