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scnpilot_p_inoc_scaffold_145_curated_156

Organism: scnpilot_dereplicated_Burkholderiales_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(161146..161946)

Top 3 Functional Annotations

Value Algorithm Source
Type III secretory pathway protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LR23_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 258.0
  • Bit_score: 295
  • Evalue 5.10e-77
hscT; type III secretory pathway protein; K03228 type III secretion protein SctT similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 252.0
  • Bit_score: 156
  • Evalue 1.20e-35
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 267.0
  • Bit_score: 505
  • Evalue 4.50e-140

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Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 801
ATGGGAGAAACCTTTGCCGCGGTGAACAACGTCAGCGAAATGGCGTTGCTGGCCGCGCTTGCCAGCGTGCGCTTTGCTACCGCCTTCGTGCTGTTGCCCCTGCTGGCCCAGGAAACCGTGCCCCAGCTCGTGCGGGGCGCCATTTTTCTTGCGTTCGGAGTCATCACACTGGCCCTGCAGCCTGCGGTCAACGTCACCGGCTGGAGCGTTTCCCAATGGATCGGGTTGTTCTCCAAAGAAGCCTTCATCGGCCTGGCTCTGGGCATGCTGCTGGCCGCTGTGCTCTGGGCGTTCGACGCCGCCGGCGAGATCATTGACGGCGCGATCGGACTGTCGCAGGCGCAGGTCACAGACCCTCTCTCCGGGCGTCAGACCTCGCTTTCAGGGGCCTTCCTGGGTCGCTTGGCTGTGTACCTGTTTATGGCCTCGGGTGGCCTCATGCTCTGGATCGGCGTCCTCATGGAAAGCTTTGTGCTGTGGCCCCTGGCCCAGCCTGGCCTTGCTCCGCGCCCAGCCGGAGTCACCTTGTTTGAGAGCGCCTTCGCGCAATTTGCGGGCCTGAGCTTCCTGCTCGCTGCGCCCACCCTGGTAGTCATGTACGCCATTGACCTGGCGCTGGGCCTCATGAATCGTTTCGCGCCCCAACTCAATCTGTACTCGTTGTCCAGCTCCCTCAAAAGCGTGGCTGCCATCCTGCTGTGGTTGGTCATGCTCACCACCTTGGCCAAGACACTGCTGAACTACCTGGCTGCCCTTTTCCCGACACTGCTGCACAAGATGCAGACCCTGCTGCCCACCTGA
PROTEIN sequence
Length: 267
MGETFAAVNNVSEMALLAALASVRFATAFVLLPLLAQETVPQLVRGAIFLAFGVITLALQPAVNVTGWSVSQWIGLFSKEAFIGLALGMLLAAVLWAFDAAGEIIDGAIGLSQAQVTDPLSGRQTSLSGAFLGRLAVYLFMASGGLMLWIGVLMESFVLWPLAQPGLAPRPAGVTLFESAFAQFAGLSFLLAAPTLVVMYAIDLALGLMNRFAPQLNLYSLSSSLKSVAAILLWLVMLTTLAKTLLNYLAALFPTLLHKMQTLLPT*