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scnpilot_p_inoc_scaffold_145_curated_169

Organism: scnpilot_dereplicated_Burkholderiales_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(171160..172917)

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion outer membrane pore, YscC/HrcC family n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLU3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 621.0
  • Bit_score: 496
  • Evalue 3.30e-137
type III secretion outer membrane pore, YscC/HrcC family similarity KEGG
DB: KEGG
  • Identity: 35.4
  • Coverage: 568.0
  • Bit_score: 317
  • Evalue 6.60e-84
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 589.0
  • Bit_score: 1061
  • Evalue 0.0

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Taxonomy

R_Burkholderiales_64_960 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1758
ATGACCGTGCGAGAGCAGCCAATTGCAGCGTTCTTGCAAGACTTCTTCGGCACCATGGACGTCCCGGTCTCGGTGAGTCCTGGCGTCAAAGGGGCCGTCAACGGCGTGTTCCGGGGAACGGCTGAGAAAGTCTTCTCCAGCATCCAGCGTTCGTTCGGGCTCATGGCTTATTACGACGGTGCGGTCGTGCATGTGTACACCCCCGCTGAAGTCACCACACGTACTTTTGCTATGCGCCAGGGTGACGCCCGGCAAGTCATCAATACTGCGCGCGACATGCAGATTCTGGACCCGCGCAACACTCTGCGTGTGAGCCAGAGTGGAGGGCTCATTGCCAGCGGCAACCGCCGGTTCGTCGAGCTTGTGGGTGAGCTGGCCTCGGGTCAGCAGAGCCAATCCACCACCCTCGCGCCCGTTGGCTTCAAGGTGTACTACCTGAAGTACGCCTGGGCCCAGGACGTCAGTGCGCAGTACGGCGGCACCGTCACCGTCATTCCCGGCGTGGCGAGCATTCTGCGTTCGTTGTTGACCGCACAGCGGGGTAATGCATCCCCGGCACTTACACAGTACCGGGGGGCTTCCGAGCCGGGCCTGCGTGGGCAGGGGCTGGCGCGACAAGGCACGCTGGGCGCTGCCGGTGCCAACCCCATGCTGGCTTCCGCCGAGACCGTGCAGCAGGCATGGGGCGGCCGGCCCGGCGGGGTGCAGGTGGCCAGTGTGGACGCCTCGTTGCTGGAGGGGCTGGGTTCCAGCTCCGCGGCCAACCAGGCCCGCGTCGAGGCCGACACCCGTCTCAATGCCGTGATCGTGCGCGATTTGCCAGAGCGTCTGCCTTACTACGACGAGCTCATCAAGTCGCTGGACATTGAGCCCCAGGCCCTGGAGATCGAAGCAACCATCATCGATCTGAGCACCGACAAGCTGCGAGAGTTGGGCATCAACTGGCGTCTGAGTGGAGACCGCTATTCCTTCCTGTTTGGCAACGGAACCAGCAGCGATACCAGCCTGTTGGGCAGCACGCCCGTCCAGAGCATTACGCCGGCGGGCGACGGCGGATTCATGTCTCTGGTGCTGGGCGGGCGCAACAACTTTGTGGCCCGGATCAACGCATTGCAGAACAAGGGCGTGGCCCGCGTTGTCTCCAGCCCTCAGGTCATGACACTGTCTAACGTCGAGGCGCTCTTTGACATCAACAAGAGCTTCTACGTACGGGTGGCGGGGCGAGAGCAGGTCGACCTCTACAAGGTGTCGGCAGGCACATCCCTGCGCGTGACGCCCCATGTGTTCCAGGAAGGCTCTGATGTGCGCATCAAGCTACTGGTGCAGATTGAAGACGGCGGCATCAACGGAGCTAGTCAGGTCGACTCCATACCGATTGTCGAGCGCTCTTCCATCAATACCCAGGCCCTGATTGGCGCTGGCGAGAGTCTGCTGATCGGCGGCATGGTAAAGGAGTCCAGCGGAGAGGGTGTTTCCAAGGTTCCATTCCTGGGAGATATTCCCGTGGCCGGCGCTCTGTTCCGCTCGCACAACGACCAGCAAGAACGGGTTGAACGCCTCTTCCTCATCTCGCCACGCCTCATCCCGGCCCGCCGTGCAACGAGTGCCTCAGCGCCGACGGGCCCGCTGCGCCCCGGCGGAGCGGTGGCAGCGCCACCCATGCCCGCGCTCGAAGAGCCTGCAGCGCCTACCCGCAGCTCCACGGTTGTTGAGTCCGGACCTGCAATTGCCCAGGGCTTGGGTGAGCAGGCACCGTGA
PROTEIN sequence
Length: 586
MTVREQPIAAFLQDFFGTMDVPVSVSPGVKGAVNGVFRGTAEKVFSSIQRSFGLMAYYDGAVVHVYTPAEVTTRTFAMRQGDARQVINTARDMQILDPRNTLRVSQSGGLIASGNRRFVELVGELASGQQSQSTTLAPVGFKVYYLKYAWAQDVSAQYGGTVTVIPGVASILRSLLTAQRGNASPALTQYRGASEPGLRGQGLARQGTLGAAGANPMLASAETVQQAWGGRPGGVQVASVDASLLEGLGSSSAANQARVEADTRLNAVIVRDLPERLPYYDELIKSLDIEPQALEIEATIIDLSTDKLRELGINWRLSGDRYSFLFGNGTSSDTSLLGSTPVQSITPAGDGGFMSLVLGGRNNFVARINALQNKGVARVVSSPQVMTLSNVEALFDINKSFYVRVAGREQVDLYKVSAGTSLRVTPHVFQEGSDVRIKLLVQIEDGGINGASQVDSIPIVERSSINTQALIGAGESLLIGGMVKESSGEGVSKVPFLGDIPVAGALFRSHNDQQERVERLFLISPRLIPARRATSASAPTGPLRPGGAVAAPPMPALEEPAAPTRSSTVVESGPAIAQGLGEQAP*