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scnpilot_p_inoc_scaffold_145_curated_171

Organism: scnpilot_dereplicated_Burkholderiales_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(175223..175534)

Top 3 Functional Annotations

Value Algorithm Source
slt; peptidoglycan N-acetylmuramoylhydrolase (EC:3.2.1.17); K01185 lysozyme [EC:3.2.1.17] similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 111.0
  • Bit_score: 104
  • Evalue 2.00e-20
Lytic transglycosylase catalytic subunit (Fragment) n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRC1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 91.0
  • Bit_score: 124
  • Evalue 7.90e-26
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 104.0
  • Bit_score: 186
  • Evalue 1.80e-44

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Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGCAAGTGATTCCCCCCACCGCACGCCGCTTTGGTGTGGACGGCGCAGAGCAACTGCATGATCCGCAGACGAACCTCCGCGTCAGTGCCCGGTATCTCAAAACCTTGCAGCAGCGGTTTGGCAATGACCTGGAATTGGTGCTTGCAGCCTACAACGCCGGTGAAGGTGCCGTGGAAAAGCACGGCCGCAAGATCCCGCCCTACCGCGAGACCCAAGACTACGTCCGCAAAGTGCTCTCCGAATACGCGCTGCTGCGCGGAGTCAGCGCCCAGCAGGCGGTCCAGCCTCCCTCAGGGAAGGACGTCCTGTGA
PROTEIN sequence
Length: 104
MQVIPPTARRFGVDGAEQLHDPQTNLRVSARYLKTLQQRFGNDLELVLAAYNAGEGAVEKHGRKIPPYRETQDYVRKVLSEYALLRGVSAQQAVQPPSGKDVL*