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scnpilot_p_inoc_scaffold_145_curated_173

Organism: scnpilot_dereplicated_Burkholderiales_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 176437..177717

Top 3 Functional Annotations

Value Algorithm Source
Translocation protein in type III secretion n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQ61_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 387.0
  • Bit_score: 389
  • Evalue 5.40e-105
hscU; translocation protein in type III secretion; K03229 type III secretion protein SctU similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 354.0
  • Bit_score: 255
  • Evalue 2.90e-65
Tax=GWA2_Burkholderiales_64_37_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 427.0
  • Bit_score: 826
  • Evalue 1.40e-236

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Taxonomy

GWA2_Burkholderiales_64_37_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1281
ATGGCCGGCCAAGACGACAGTGGCGACAAGACAGAAAAGCCGACACCCAAGAAGCTTCAGGACGCTCGGAAAAAGGGCGAGGTTTCCAAGAGCAAGGACCTGACAGCGACAGCAACATTGCTGACCGTGCTGCTGCTAGCCACTGTGGCCTTGCCGATGGTGGGGCAGCAGATGACGTCACTGATTGAACTGAGCCTGTGGGGATTGCAGGGCCCTTTTCCTGAGGCACTCGCCCAACTGGGGTGGCAAGCGCTGCGCACATTGCTGTTGCTGGTGGGGCTGGTGGTGGTACCCGTTGCGGTGGTCGGCGTCCTGGTGGAGTTTCTGCAGACCGGCCCTGTGCTGACGATGGAGAAAATCTGGCCCAAGGCAGAACACCTGAACCCCGCCAGCGGCCTCAAACGCATGTTCTCGCTGGACAACCTGGTCGAGCTGCTCAAGTCACTGCTCAAGACCGTGCTCGTGGCCGTCATTGCCTGGATTGCGCTGAAGGACTTGCTGCCCGATCTGCCACTGCTTGCGCGCGCGAAGCCAGAGGCCGTGGGATCGGCTCTCTGGCACGCCAGCTGGACGCTGCTGGCGTGGGTCACGGGCGCGTTTCTCCTGGTGTCGGCGCTGGACCTGGCATGGCAACGCTACAGCTTCATGAAGAAGATGCGCATGAGCATGCGCGACATACGCCAGGAAATGAAGGACGCCGAAGGCGACCCGCATCTCAAGGGCCATCGCAAGCAGCTGCAGCAGGAGTGGGCTCAGCAAGGCGCCAACAAGGCGGCAGCCAGTGCCCATGTGCTGGTGGTCAATCCCACCCATGTCGCGATTGCCATCGACTACCATCGCGACCGATGCCCGGTGCCCACGGTCATTGCCAAGGCGCAGGACGATGATGCTCTGGCCATGAGAACCGCCGCACAGGAGGCCGGCGTTCCCGTACTGCGCAACATCGAAATCGCCCGTCAATTGCTGGCCGACACAGAGCCCGGCGACGTCATTCCTGCGGAGCTGTTCGACATCATCGCGACCGTGATCCTGTGGGCGCAAGATGTGCGCTATGAACTCGAACGTGCCTCGCAGACCTCGCATGCGAAGTCTTCCACAGAGTCAGAACCGCGCCGTCCTCGACGCCCCGTTCCTGGTGAAGACCTGACCCGGTACCCGCTCTCTACGGCCCATGACGCAGCGGGCGCAGCCGCCCCACCCGGGGGCTGGAGAACCAACCGCTTTGCCCGCTATGTTCCCAGACGGTGGCGATCCGGAGCGGCCACTGACACAGCATCATGA
PROTEIN sequence
Length: 427
MAGQDDSGDKTEKPTPKKLQDARKKGEVSKSKDLTATATLLTVLLLATVALPMVGQQMTSLIELSLWGLQGPFPEALAQLGWQALRTLLLLVGLVVVPVAVVGVLVEFLQTGPVLTMEKIWPKAEHLNPASGLKRMFSLDNLVELLKSLLKTVLVAVIAWIALKDLLPDLPLLARAKPEAVGSALWHASWTLLAWVTGAFLLVSALDLAWQRYSFMKKMRMSMRDIRQEMKDAEGDPHLKGHRKQLQQEWAQQGANKAAASAHVLVVNPTHVAIAIDYHRDRCPVPTVIAKAQDDDALAMRTAAQEAGVPVLRNIEIARQLLADTEPGDVIPAELFDIIATVILWAQDVRYELERASQTSHAKSSTESEPRRPRRPVPGEDLTRYPLSTAHDAAGAAAPPGGWRTNRFARYVPRRWRSGAATDTAS*