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scnpilot_p_inoc_scaffold_257_curated_173

Organism: scnpilot_dereplicated_Burkholderiales_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 196212..196463

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D0E5_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 77.0
  • Bit_score: 83
  • Evalue 1.30e-13
helix-turn-helix domain protein similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 77.0
  • Bit_score: 83
  • Evalue 3.90e-14
Helix-turn-helix domain protein {ECO:0000313|EMBL:ACS22489.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 77.0
  • Bit_score: 83
  • Evalue 1.80e-13

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
ATGGGCTCCTTTTCGCCCATGCAGAAGACGCTCTACAGTCGCCAGTACCAGCACATGCTCAAGTTGCTGAGGGAGAAGCGCGTTCATTCCGAGGTGAGCCAAGCTGAACTGGCGAAGCGGCTGGAATGGACGCAGGCGGAGGTGAGCAAGTGCGAAACTGGGGTGAGGCGGCTGGATGTCATCGAACTCAAGCTATGGGTTGAGGCACTGGACGGCGATCTGTCTGCCTTTGTGCAGGATCTGCAGGGATAG
PROTEIN sequence
Length: 84
MGSFSPMQKTLYSRQYQHMLKLLREKRVHSEVSQAELAKRLEWTQAEVSKCETGVRRLDVIELKLWVEALDGDLSAFVQDLQG*