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scnpilot_p_inoc_scaffold_1107_curated_28

Organism: scnpilot_dereplicated_Burkholderiales_9

near complete RP 47 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 11 / 38
Location: 23985..25580

Top 3 Functional Annotations

Value Algorithm Source
surface layer protein NpdA n=1 Tax=Acidovorax avenae RepID=UPI0002EC700D similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 582.0
  • Bit_score: 369
  • Evalue 7.20e-99
Surface layer protein NpdA {ECO:0000313|EMBL:EZP58778.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.9
  • Coverage: 591.0
  • Bit_score: 372
  • Evalue 9.20e-100
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 576.0
  • Bit_score: 367
  • Evalue 6.60e-99

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Taxonomy

Delftia sp. RIT313 → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1596
ATGAAGAAAAGTGTTCTTGCCCTGGGTGTTGCGGCAGCCTTGGGTGGTTTTGCCGGTAGCGCTCTCGCTATTACCGATGCGGCACCTGTGGTTCCTCTGGTGAACCCAGCCACTGCCCTGACGTTGAGCCCCACGGGTACCGGTCATATCCTGATCGTGCCTTACTACTCGGCACAGAACGGCAACAGAACCCTGCTGTCCCTCACCAATACCGACAATACGAACGGCAAGGTCGTCAAGGTGCGTTTCCGCGGTGCAGCCAATTCGGACGACGTGAACGACTTCCAGGTCTTCCTCTCGCCCGGCGACATCTGGACGGCCGATATCCACCAGGGCCCCAATGGCGTGGCTGAATTGACCACTGCCGATGCAAGCTGCACCAAGCCCGCCAACGTCAATGGCGACTTCGGCACGGGTCGTTTCAAGAGCACCTGGGATGCGGATCGCAAGGCCTCCAATACCCGTGAAGGCTATATCGAAATCCTGAACATGGCCGACGTGCCCCCGGCTGCGGCTTTGTACAACGCCATCAAGCACAAGGACGGCGTTGCAGCTTGCGCCAGCTCCTCCATCGCCAATGGCACTGCAGGATCGGCTGCAGCGTGGACGTATCTTGACGGCAACCCCAAGCAAGGTACGGGCCGTTCGACTGGTGATCTGGAAGGTGCTTCGGCGGGCTTGGCTAAGCCGACAACGGGGTTGATGGCCAACTGGACCATCATCAATGTGCCGCGTGCCGTAGCTTGGTCGGGTGCCGCTACTGCTGTCGAGGCCACTGATGCTGGCGGACTCCCAGCTAACGGAGCCATTGTGTACTTCCCGCAGGTCAATCAGGCCACGGGTGGCAATATCGCGGCTCCCATTGCTACTGCCTACACCGCAGACCCATTGTTGACGCCTGCTACTCCCTTGGTGACTGGTAATGCCCAGTTCGATCTGCCTGATTTGTCCACGCCTTATGCTGGTGCAGCAAATCCGTCTGCCCAAGCGGCTGCTCTGTCGACCGCGATTTCGACGAGCGCAGTCAGCAATGAATTCTGGACGTTGGAATCCATTGGGGGTGCCACCGATTGGGTGTTCTCCATGCCTACCCGCCGCTATGCGGTGGCTGTCGACTACACGGCGAGCCCCAGTGCGCCAGAGTACAACAGCGCTAACAAAACTCAGTTTGATACTATCAATACGCAGATGGACGGCGATCAATTGTGCGTGAACGGCATCACCTGGAACTACTGGAACCGCGAAGAGGCGACGCAAGCCGGTGACGTGACCAACACCACGCGTTCGCCTGGCGAAGAGGCCGCTCCGGGTGCCATGTTCTGCGGTGAAACCAGCGTGCTGAGCATCAACGATGTGGCCGCCGGTTCTGCACCGACCAAGTCCCTGGGTGCTCAAGTGGCCGTCACCAACTTCAACCAGAAGGGTGCCGATGGCAAGATCATGCAAGAAGGCTGGATGAAGATCACCACGCCAGGCGCGGCGGTTACCAACCTGCCTATCCTGGGTTCTGCCTTCATGATGGTGCAAAACAAGAATGCAAACCCCGGCGATCCGGGCCACTTCAACATGACCTTCCCGCACCGTACGGCGCGTTGA
PROTEIN sequence
Length: 532
MKKSVLALGVAAALGGFAGSALAITDAAPVVPLVNPATALTLSPTGTGHILIVPYYSAQNGNRTLLSLTNTDNTNGKVVKVRFRGAANSDDVNDFQVFLSPGDIWTADIHQGPNGVAELTTADASCTKPANVNGDFGTGRFKSTWDADRKASNTREGYIEILNMADVPPAAALYNAIKHKDGVAACASSSIANGTAGSAAAWTYLDGNPKQGTGRSTGDLEGASAGLAKPTTGLMANWTIINVPRAVAWSGAATAVEATDAGGLPANGAIVYFPQVNQATGGNIAAPIATAYTADPLLTPATPLVTGNAQFDLPDLSTPYAGAANPSAQAAALSTAISTSAVSNEFWTLESIGGATDWVFSMPTRRYAVAVDYTASPSAPEYNSANKTQFDTINTQMDGDQLCVNGITWNYWNREEATQAGDVTNTTRSPGEEAAPGAMFCGETSVLSINDVAAGSAPTKSLGAQVAVTNFNQKGADGKIMQEGWMKITTPGAAVTNLPILGSAFMMVQNKNANPGDPGHFNMTFPHRTAR*