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scnpilot_p_inoc_scaffold_1107_curated

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1107_curated_1
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..1864
-----------------
DNA (1863bp)
protein (621aa)
glycine--tRNA ligase (EC:6.1.1.14); K01879 glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
Glycine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255}; EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00255};; Glycyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255}; Short=GlyRS {ECO:0000255|HAMAP-Rule:MF_00255};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Glycine--tRNA ligase beta subunit n=1 Tax=Acidovorax sp. (strain JS42) RepID=SYGB_ACISJ rbh
scnpilot_p_inoc_scaffold_1107_curated_2
unknown

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1864..2100
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1107_curated_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2108..2845
-----------------
DNA (738bp)
protein (246aa)
phospholipid/glycerol acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000367B0E7
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:GAD20271.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_1107_curated_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2847..3557
-----------------
DNA (711bp)
protein (237aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5C5_ALIDK
hypothetical protein; K07043
Uncharacterized protein {ECO:0000313|EMBL:ADU98404.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_1107_curated_5
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3610..4092)
-----------------
DNA (483bp)
protein (161aa)
peptidase M23B n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003747DE4
Peptidoglycan-binding LysM {ECO:0000313|EMBL:GAD20274.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
peptidoglycan-binding LysM
scnpilot_p_inoc_scaffold_1107_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4235..5005
-----------------
DNA (771bp)
protein (257aa)
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Type III pantothenate kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5X6_9BURK
scnpilot_p_inoc_scaffold_1107_curated_7
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5054..6118
-----------------
DNA (1065bp)
protein (355aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
dTDP-glucose 4,6-dehydratase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3G2_ACISJ
scnpilot_p_inoc_scaffold_1107_curated_8
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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6177..6491
-----------------
DNA (315bp)
protein (105aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B0R4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AJF06874.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterraneus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1107_curated_9
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6526..7416
-----------------
DNA (891bp)
protein (297aa)
dtdp-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:ACM32034.1}; EC=1.1.1.133 {ECO:0000313|EMBL:ACM32034.1};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
dTDP-4-dehydrorhamnose reductase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MCN4_ACIET
scnpilot_p_inoc_scaffold_1107_curated_10
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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7481..7723
-----------------
DNA (243bp)
protein (81aa)
Plasmid stability protein n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GWB6_9GAMM
plasmid stability protein
Uncharacterized protein {ECO:0000313|EMBL:ACV37670.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
scnpilot_p_inoc_scaffold_1107_curated_11
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7720..8115
-----------------
DNA (396bp)
protein (132aa)
Ribonuclease VapC n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P3N6_AROAE
nucleic acid-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
scnpilot_p_inoc_scaffold_1107_curated_12
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8131..9018
-----------------
DNA (888bp)
protein (296aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3G4_ACISJ
scnpilot_p_inoc_scaffold_1107_curated_13
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9058..9630
-----------------
DNA (573bp)
protein (191aa)
dtdp-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TY14_ALIDB
dTDP-4-dehydrorhamnose 3,5-epimerase RmlC {ECO:0000313|EMBL:GAO22210.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_1107_curated_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9652..11523)
-----------------
DNA (1872bp)
protein (624aa)
hypothetical protein id=12549598 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1107_curated_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11551..12357)
-----------------
DNA (807bp)
protein (269aa)
Fatty acid hydroxylase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BXV7_DELAS
fatty acid hydroxylase
Fatty acid hydroxylase {ECO:0000313|EMBL:ABX33892.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_p_inoc_scaffold_1107_curated_16
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12557..14278
-----------------
DNA (1722bp)
protein (574aa)
General secretory pathway protein E n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q490_ACIAP
general secretory pathway protein E; K02454 general secretion pathway protein E
General secretory pathway protein E {ECO:0000313|EMBL:ADX47920.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_p_inoc_scaffold_1107_curated_17
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14453..15688
-----------------
DNA (1236bp)
protein (412aa)
Type II secretion system protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1D4_ACIDE
Type II secretion system protein {ECO:0000313|EMBL:EER61692.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
type II secretion system protein; K02455 general secretion pathway protein F
scnpilot_p_inoc_scaffold_1107_curated_18
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15672..16115
-----------------
DNA (444bp)
protein (148aa)
General secretion pathway protein G n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WFR1_VEREI
general secretion pathway protein G; K02456 general secretion pathway protein G
General secretion pathway protein G {ECO:0000313|EMBL:ABM56468.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
scnpilot_p_inoc_scaffold_1107_curated_19
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16252..16644
-----------------
DNA (393bp)
protein (131aa)
General secretion pathway protein H n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WFR0_VEREI
General secretion pathway protein GspH {ECO:0000313|EMBL:KJA11981.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
general secretion pathway protein H; K02457 general secretion pathway protein H
scnpilot_p_inoc_scaffold_1107_curated_20
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16641..17048
-----------------
DNA (408bp)
protein (136aa)
General secretion pathway protein I n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WFQ9_VEREI
general secretion pathway protein I; K02458 general secretion pathway protein I
General secretion pathway protein I {ECO:0000313|EMBL:ABM56466.1}; Flags: Precursor;; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
scnpilot_p_inoc_scaffold_1107_curated_21
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17045..17704
-----------------
DNA (660bp)
protein (220aa)
General secretion pathway protein J n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSZ3_9BURK
General secretion pathway protein J {ECO:0000313|EMBL:EHL24487.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
general secretion pathway protein J; K02459 general secretion pathway protein J
scnpilot_p_inoc_scaffold_1107_curated_22
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17704..18543
-----------------
DNA (840bp)
protein (280aa)
General secretory pathway protein K n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q484_ACIAP
general secretory pathway protein K; K02460 general secretion pathway protein K
General secretory pathway protein K {ECO:0000313|EMBL:ADX47914.1}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_p_inoc_scaffold_1107_curated_23
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18551..19618
-----------------
DNA (1068bp)
protein (356aa)
Fimbrial assembly family protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TUQ6_ACIAC
Uncharacterized protein {ECO:0000313|EMBL:KJA12059.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
fimbrial assembly family protein; K02461 general secretion pathway protein L
scnpilot_p_inoc_scaffold_1107_curated_24
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19615..20169
-----------------
DNA (555bp)
protein (185aa)
General secretion pathway protein M n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WFQ5_VEREI
general secretion pathway protein M; K02462 general secretion pathway protein M
General secretion pathway protein M {ECO:0000313|EMBL:ABM56462.1}; Flags: Precursor;; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
scnpilot_p_inoc_scaffold_1107_curated_25
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20166..20690
-----------------
DNA (525bp)
protein (175aa)
Uncharacterized protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WFQ4_VEREI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM56461.1}; Flags: Precursor;; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
scnpilot_p_inoc_scaffold_1107_curated_26
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20690..23137
-----------------
DNA (2448bp)
protein (816aa)
General secretion pathway protein D n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1E1_ACIDE
General secretion pathway protein D {ECO:0000313|EMBL:EER61699.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
general secretion pathway protein D; K02453 general secretion pathway protein D
scnpilot_p_inoc_scaffold_1107_curated_27
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23340..23774
-----------------
DNA (435bp)
protein (145aa)
Uncharacterized protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WFQ2_VEREI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM56459.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
scnpilot_p_inoc_scaffold_1107_curated_28
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23985..25580
-----------------
DNA (1596bp)
protein (532aa)
surface layer protein NpdA n=1 Tax=Acidovorax avenae RepID=UPI0002EC700D
Surface layer protein NpdA {ECO:0000313|EMBL:EZP58778.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1107_curated_29
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25700..26539
-----------------
DNA (840bp)
protein (280aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q477_ACIAP
scnpilot_p_inoc_scaffold_1107_curated_30
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26745..26990
-----------------
DNA (246bp)
protein (82aa)
Prevent host death protein n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RCE9_9RHOO
Prevent host death protein {ECO:0000313|EMBL:EGK71729.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
prevent-host-death family protein
Displaying items 1-30 of 32 in total

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