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scnpilot_p_inoc_scaffold_1930_curated_7

Organism: scnpilot_dereplicated_Burkholderiales_9

near complete RP 47 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 11 / 38
Location: comp(6182..6610)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 140.0
  • Bit_score: 139
  • Evalue 4.60e-30
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI000378B17D similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 135.0
  • Bit_score: 147
  • Evalue 1.20e-32
PilT protein domain protein similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 137.0
  • Bit_score: 134
  • Evalue 2.50e-29

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Taxonomy

Thiocapsa marina → Thiocapsa → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
GTGATCATCGCCGACGCGGGTTTTTTCTACGCGCTGGCCGATGCCGACGACGCCTGGCACGCCCGAGCGGCGCGGGCGCTTTCCACACAGGAGGAAGGCTGGGTGACCACCTGGCCCGTGCTGACCGAGGCCACGCACCTGATCACGTGCTGGATCGGCACCGATGCAGCGCACGCCCTGCTGCGCGACGTGGCCGGCGGGGGCATTGCCGTGTGGCAGTGGGACATGCCGCAAACCGAGCGACTGGCGCACCTCATGGAACGCTACGCCAGCCTGCCCATGGATCTGGCCGACGGCTCGCTGGTGCTGCTGGCGGAGCACCTGGGGCACGGGCGCATCCTGACCACCGATGAGCGCGATTTCGGCGCCTACCGCTTCAAGAGCCGCGAGCCGTTTCAGAACCTGCTCGCCGAAGGCGCCCATGGCTGA
PROTEIN sequence
Length: 143
VIIADAGFFYALADADDAWHARAARALSTQEEGWVTTWPVLTEATHLITCWIGTDAAHALLRDVAGGGIAVWQWDMPQTERLAHLMERYASLPMDLADGSLVLLAEHLGHGRILTTDERDFGAYRFKSREPFQNLLAEGAHG*