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scnpilot_p_inoc_scaffold_1077_curated

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1077_curated_1
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..667)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000379AE13
phosphoesterase, PA-phosphatase-like protein
Phosphoesterase, PA-phosphatase related protein {ECO:0000313|EMBL:ABM34046.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_p_inoc_scaffold_1077_curated_2
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(729..2075)
DNA (1347bp) protein (449aa)
D-amino-acid dehydrogenase {ECO:0000313|EMBL:EER60299.1}; EC=1.4.99.1 {ECO:0000313|EMBL:EER60299.1};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
D-amino-acid dehydrogenase (EC:1.4.99.1); K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
D-amino-acid dehydrogenase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5F1_ACIDE
scnpilot_p_inoc_scaffold_1077_curated_3
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2154..3068
DNA (915bp) protein (305aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax avenae RepID=UPI0002F73D10
LysR family transcriptional regulator; K05596 LysR family transcriptional regulator, chromosome initiation inhibitor
Transcriptional regulator, ArgP, LysR family {ECO:0000313|EMBL:ADX44091.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_p_inoc_scaffold_1077_curated_4
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3105..4331)
DNA (1227bp) protein (409aa)
Sodium/glutamate symporter n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZQI7_PSEAC
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO45577.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
gltS; sodium/glutamate symport carrier protein
scnpilot_p_inoc_scaffold_1077_curated_5
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4414..5082)
DNA (669bp) protein (223aa)
Cyclic nucleotide-binding protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8P2_ACIDE
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:EER59151.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
cyclic nucleotide-binding protein
scnpilot_p_inoc_scaffold_1077_curated_6
unknown

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comp(5391..5657)
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1077_curated_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5894..6463)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003682296
Uncharacterized protein {ECO:0000313|EMBL:GAD22663.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1077_curated_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6537..7016)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003796383
Uncharacterized protein {ECO:0000313|EMBL:GAD24724.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_1077_curated_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7085..7909)
DNA (825bp) protein (275aa)
UPI0003A7AAA9 related cluster n=1 Tax=unknown RepID=UPI0003A7AAA9
Uncharacterized protein {ECO:0000313|EMBL:GAD22660.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
triple helix repeat-containing collagen
scnpilot_p_inoc_scaffold_1077_curated_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7952..11617)
DNA (3666bp) protein (1222aa)
UPI0003A2CBDB related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003A2CBDB
Uncharacterized protein {ECO:0000313|EMBL:GAD22659.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
cell wall/surface repeat protein
scnpilot_p_inoc_scaffold_1077_curated_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11819..12886)
DNA (1068bp) protein (356aa)
AraC family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037976C1
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:GAD22658.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_1077_curated_12
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12896..13438)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GV75_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC18717.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
scnpilot_p_inoc_scaffold_1077_curated_13
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13465..13791)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82UD1_NITEU
hypothetical protein
Tax=GWA2_Curvibacter_64_110_curated
scnpilot_p_inoc_scaffold_1077_curated_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13806..15266)
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003787316
Endoproteinase Arg-C {ECO:0000313|EMBL:GAD22762.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
endoproteinase Arg-C
scnpilot_p_inoc_scaffold_1077_curated_15
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15499..16518)
DNA (1020bp) protein (340aa)
Putative uncharacterized protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q6N8_ACIAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADX46984.1}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_p_inoc_scaffold_1077_curated_16
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16713..17135)
DNA (423bp) protein (141aa)
UspA domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W254_ACISJ
UspA domain-containing protein
UspA domain protein {ECO:0000313|EMBL:ABM40329.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_1077_curated_17
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17162..18034)
DNA (873bp) protein (291aa)
metallophosphoesterase n=1 Tax=Acidovorax radicis RepID=UPI00023786BB
Metallophosphoesterase {ECO:0000313|EMBL:EZP52131.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
metallophosphoesterase
scnpilot_p_inoc_scaffold_1077_curated_18
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18128..19996)
DNA (1869bp) protein (623aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
phosphoenolpyruvate carboxykinase (gtp) (EC:4.1.1.32); K01596 phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
Phosphoenolpyruvate carboxykinase [GTP] n=2 Tax=Alicycliphilus denitrificans RepID=E8TS60_ALIDB
scnpilot_p_inoc_scaffold_1077_curated_19
unknown

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comp(20332..20472)
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1077_curated_20
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20726..21925)
DNA (1200bp) protein (400aa)
threonine dehydratase (EC:4.3.1.19)
threonine dehydratase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003731138
Threonine dehydratase {ECO:0000313|EMBL:GAD22650.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_1077_curated_21
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21973..24438)
DNA (2466bp) protein (822aa)
Fe(3+)-pyochelin receptor 3 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HKB0_ACHXA
Fe(3+)-pyochelin receptor 3
Fe(3+)-pyochelin receptor 3 {ECO:0000313|EMBL:ADP18065.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
scnpilot_p_inoc_scaffold_1077_curated_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24591..25550)
DNA (960bp) protein (320aa)
Transmembrane sensor n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X1K0_DELAC
Transmembrane sensor {ECO:0000313|EMBL:EPD41278.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
anti-FecI sigma factor FecR; K07165 transmembrane sensor
scnpilot_p_inoc_scaffold_1077_curated_23
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25540..26049)
DNA (510bp) protein (170aa)
RNA polymerase sigma factor, partial n=1 Tax=Comamonas sp. B-9 RepID=UPI0003959EB7
RNA polymerase sigma factor {ECO:0000313|EMBL:KEH14324.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_p_inoc_scaffold_1077_curated_24
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26118..28544)
DNA (2427bp) protein (809aa)
TonB-dependent siderophore receptor n=1 Tax=Comamonas testosteroni S44 RepID=D8DCN2_COMTE
Ligand-gated channel {ECO:0000313|EMBL:KGH04596.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
scnpilot_p_inoc_scaffold_1077_curated_25
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28788..29768)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003751673
Fe2+-dicitrate sensor, membrane component {ECO:0000313|EMBL:GAD23456.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
anti-FecI sigma factor FecR; K07165 transmembrane sensor
scnpilot_p_inoc_scaffold_1077_curated_26
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29765..30274)
DNA (510bp) protein (170aa)
RNA polymerase sigma factor n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036628F8
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:GAD23455.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_p_inoc_scaffold_1077_curated_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30378..32777)
DNA (2400bp) protein (800aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WX56_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD44358.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
TonB-dependent siderophore receptor
scnpilot_p_inoc_scaffold_1077_curated_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32878..33870)
DNA (993bp) protein (331aa)
Anti-FecI sigma factor, FecR n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BW91_DELAS
FecR family protein {ECO:0000313|EMBL:KFJ08935.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
anti-FecI sigma factor FecR; K07165 transmembrane sensor
scnpilot_p_inoc_scaffold_1077_curated_29
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33867..34382)
DNA (516bp) protein (172aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AY81_DELSC
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEF90498.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
scnpilot_p_inoc_scaffold_1077_curated_30
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(34470..36875)
DNA (2406bp) protein (802aa)
Ferripyoverdine receptor 2 n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z7D9_9RHOO
Ferripyoverdine receptor 2 {ECO:0000313|EMBL:ENO90472.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
ferripyoverdine receptor 2; K02014 iron complex outermembrane recepter protein
Displaying items 1-30 of 38 in total

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