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scnpilot_p_inoc_scaffold_1805_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1805_curated_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(107..1351)
DNA (1245bp) protein (415aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7]
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
DNA polymerase IV n=2 Tax=Alicycliphilus denitrificans RepID=E8TZA2_ALIDB
scnpilot_p_inoc_scaffold_1805_curated_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1348..2523)
DNA (1176bp) protein (392aa)
l-lactate dehydrogenase (cytochrome) (EC:1.1.2.3); K00101 L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
L-lactate dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000377732A
L-lactate dehydrogenase {ECO:0000313|EMBL:GAD22442.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_1805_curated_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2657..3190)
DNA (534bp) protein (178aa)
OmpA/MotB domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TZA9_ALIDB
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ADV00930.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_1805_curated_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3226..4473)
DNA (1248bp) protein (416aa)
UPI0003A257C4 related cluster n=1 Tax=unknown RepID=UPI0003A257C4
Diguanylate cyclase {ECO:0000313|EMBL:GAD22444.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
diguanylate cyclase
scnpilot_p_inoc_scaffold_1805_curated_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4473..5138)
DNA (666bp) protein (222aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TZB1_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO24515.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_1805_curated_6
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5199..7466)
DNA (2268bp) protein (756aa)
penicillin-binding protein 1C; K05367 penicillin-binding protein 1C [EC:2.4.1.-]
Penicillin-binding protein 1C n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WAZ6_ACISJ
Penicillin-binding protein 1C {ECO:0000313|EMBL:ABM43421.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_1805_curated_7
unknown

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comp(7575..7895)
DNA (321bp) protein (107aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1805_curated_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7892..8767)
DNA (876bp) protein (292aa)
methylglyoxal synthase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036FFB0B
Methylglyoxal synthase {ECO:0000313|EMBL:GAD22447.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1805_curated_9
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8921..9175
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=A1WAZ9_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34090.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_1805_curated_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9221..15154)
DNA (5934bp) protein (1978aa)
alpha-2-macroglobulin n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00036EE754
Alpha-2-macroglobulin domain protein {ECO:0000313|EMBL:GAD22459.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
alpha-2-macroglobulin domain-containing protein 2
scnpilot_p_inoc_scaffold_1805_curated_11
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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15320..17404
DNA (2085bp) protein (695aa)
hypothetical protein id=12552170 bin=BDI species=Delftia acidovorans genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
cell surface receptor IPT/TIG domain-containing protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
Displaying 11 items

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