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scnpilot_p_inoc_scaffold_1902_curated

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1902_curated_1
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..988)
DNA (987bp) protein (329aa)
peptidase M48, Ste24p; K07387 putative metalloprotease [EC:3.4.24.-]
Peptidase M48, Ste24p n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TIE1_ACIAC
Peptidase M48, Ste24p {ECO:0000313|EMBL:ABM30729.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_p_inoc_scaffold_1902_curated_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1359..2612
DNA (1254bp) protein (418aa)
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family n=2 Tax=Alicycliphilus denitrificans RepID=E8TS36_ALIDB
Ubiquinone biosynthesis hydroxylase
Ubiquinone biosynthesis hydroxylase {ECO:0000313|EMBL:GAO25799.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_1902_curated_3
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2743..3888)
DNA (1146bp) protein (382aa)
Putative Zn-dependent hydrolase of beta-lactamase n=1 Tax=Acidovorax sp. CF316 RepID=J0K2H0_9BURK
Putative Zn-dependent hydrolase of beta-lactamase {ECO:0000313|EMBL:EJE48545.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1902_curated_4
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3968..4594
DNA (627bp) protein (209aa)
Transcriptional regulator n=1 Tax=Acidovorax sp. CF316 RepID=J1E803_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJE48546.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
TetR family transcriptional regulator
scnpilot_p_inoc_scaffold_1902_curated_5
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4578..6497
DNA (1920bp) protein (640aa)
Radical SAM domain protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q156_ACIAP
Radical SAM domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_1902_curated_6
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6507..7586)
DNA (1080bp) protein (360aa)
Ankyrin repeat-containing protein n=1 Tax=Acidovorax sp. CF316 RepID=J0K2H3_9BURK
uncharacterized LOC100641148
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_1902_curated_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7796..9082
DNA (1287bp) protein (429aa)
Uracil-xanthine permease n=2 Tax=Alicycliphilus denitrificans RepID=E8TS34_ALIDB
Xanthine/uracil permeases {ECO:0000313|EMBL:GAD22687.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
uracil-xanthine permease
scnpilot_p_inoc_scaffold_1902_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9265..10779
DNA (1515bp) protein (505aa)
succinate CoA transferase (EC:3.1.2.1); K01067 acetyl-CoA hydrolase [EC:3.1.2.1]
Succinate CoA transferase {ECO:0000313|EMBL:ABX32732.1}; EC=3.1.2.1 {ECO:0000313|EMBL:ABX32732.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Acetyl-CoA hydrolase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WYZ3_DELAC
scnpilot_p_inoc_scaffold_1902_curated_9
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10842..11969)
DNA (1128bp) protein (376aa)
Extracellular ligand-binding receptor n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BXT4_DELAS
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EZP46261.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
extracellular ligand-binding receptor
scnpilot_p_inoc_scaffold_1902_curated_10
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12129..12554
DNA (426bp) protein (142aa)
Thioesterase superfamily protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRF3_ALIDB
Esterase {ECO:0000313|EMBL:KJA11002.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
phenylacetic acid degradation-like protein
scnpilot_p_inoc_scaffold_1902_curated_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12719..13288)
DNA (570bp) protein (190aa)
ATP/cobalamin adenosyltransferase (EC:2.5.1.17); K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17]
ATP--cobalamin adenosyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003650EAA
ATP/cobalamin adenosyltransferase {ECO:0000313|EMBL:GAD22698.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_1902_curated_12
unknown

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13478..13690
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1902_curated_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13796..15217
DNA (1422bp) protein (474aa)
Fis family transcriptional regulator; K00102 D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D-lactate dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037ACB0D
FAD/FMN-containing dehydrogenases {ECO:0000313|EMBL:GAD22700.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_1902_curated_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15625..16401
DNA (777bp) protein (259aa)
tetrathionate reductase subunit B n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003602BFE
Fe-S-cluster-containing hydrogenase components 1 {ECO:0000313|EMBL:GAD23072.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
4Fe-4S ferredoxin; K08358 tetrathionate reductase subunit B
scnpilot_p_inoc_scaffold_1902_curated_15
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16413..17450
DNA (1038bp) protein (346aa)
tetrathionate reductase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000370FA68
Polysulphide reductase NrfD {ECO:0000313|EMBL:GAD23071.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
uncharacterized LOC100489621
scnpilot_p_inoc_scaffold_1902_curated_16
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17540..20689
DNA (3150bp) protein (1050aa)
tetrathionate reductase subunit A n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037F35E8
Anaerobic dehydrogenase {ECO:0000313|EMBL:GAD23070.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
molydopterin dinucleotide-binding region; K08357 tetrathionate reductase subunit A
scnpilot_p_inoc_scaffold_1902_curated_17
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20719..22875
DNA (2157bp) protein (719aa)
gluconate 2-dehydrogenase (EC:1.1.99.3)
cytochrome C n=1 Tax=Cupriavidus sp. WS RepID=UPI0003622EEA
Cytochrome C {ECO:0000313|EMBL:KIL05230.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
scnpilot_p_inoc_scaffold_1902_curated_18
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22937..24622)
DNA (1686bp) protein (562aa)
nuclease n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000364A39F
VRR-NUC domain protein {ECO:0000313|EMBL:GAD23066.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1902_curated_19
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24700..25374
DNA (675bp) protein (225aa)
UPI0003D3BAC9 related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003D3BAC9
Response regulator {ECO:0000313|EMBL:GAD23065.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
winged helix family two component transcriptional regulator
scnpilot_p_inoc_scaffold_1902_curated_20
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25371..26807
DNA (1437bp) protein (479aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000381AC73
histidine kinase
scnpilot_p_inoc_scaffold_1902_curated_21
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26868..27428
DNA (561bp) protein (187aa)
NUDIX hydrolase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIB4_ACIET
nudix hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ACM34852.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_1902_curated_22
Pseudomonas balearica, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27425..27847)
DNA (423bp) protein (141aa)
Acid phosphatase/vanadium-dependent haloperoxidase related protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AMS9_DELSC
Acid phosphatase {ECO:0000313|EMBL:AJE16593.1}; TaxID=1123016 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas balearica DSM 6083.;"
acid phosphatase/vanadium-dependent haloperoxidase-like protein; K09775 hypothetical protein
scnpilot_p_inoc_scaffold_1902_curated_23
Pseudomonas balearica, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27850..28734)
DNA (885bp) protein (295aa)
UbiA prenyltransferase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AMS8_DELSC
Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase {ECO:0000313|EMBL:AJE16592.1}; TaxID=1123016 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas balearica DSM 6083.;"
UbiA prenyltransferase
scnpilot_p_inoc_scaffold_1902_curated_24
Pseudomonas balearica, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28764..29177
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) RepID=A1U161_MARAV
Uncharacterized protein {ECO:0000313|EMBL:AJE16591.1}; TaxID=1123016 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas balearica DSM 6083.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1902_curated_25
Pseudomonas balearica, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29174..30475
DNA (1302bp) protein (434aa)
FAD linked oxidase, N-terminal n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FC5_DECAR
FAD-linked oxidase {ECO:0000313|EMBL:AJE16590.1}; TaxID=1123016 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas balearica DSM 6083.;"
FAD linked oxidase, N-terminal
scnpilot_p_inoc_scaffold_1902_curated_26
Pseudomonas balearica, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30476..31228
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI000371CF4C
Short-chain dehydrogenase {ECO:0000313|EMBL:AJE16589.1}; TaxID=1123016 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas balearica DSM 6083.;"
short-chain dehydrogenase/reductase SDR
scnpilot_p_inoc_scaffold_1902_curated_27
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31267..32877
DNA (1611bp) protein (537aa)
UPI0003D3650B related cluster n=1 Tax=unknown RepID=UPI0003D3650B
gtrV; serotype-specific glucosyl transferase
Serotype-specific glucosyl transferase {ECO:0000313|EMBL:EID60858.1}; TaxID=1086030 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 5a str. M90T.;"
scnpilot_p_inoc_scaffold_1902_curated_28
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32943..34082
DNA (1140bp) protein (380aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYX1_9BURK
scnpilot_p_inoc_scaffold_1902_curated_29
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34140..34856)
DNA (717bp) protein (239aa)
permease n=1 Tax=Acidovorax radicis RepID=UPI00023766B5
permease
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_1902_curated_30
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34885..35445)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023766B4
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
Displaying items 1-30 of 33 in total

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